Pimephales promelas (fathead minnow): 120494280
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Entry
120494280 CDS
T08155
Symbol
irf4b
Name
(RefSeq) interferon regulatory factor 4 isoform X1
KO
K09445
interferon regulatory factor 4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120494280 (irf4b)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120494280 (irf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
120494280
NCBI-ProteinID:
XP_039549446
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MCSDEERAMTGGSGNGKLRQWLIEQVDTGKYPGLVWENDEKSIFRIPWKHAGKQDYNRDE
DAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEEIVERSQLDISDPYKVYR
IIPEGSKKGSRSIDDSQSNSNSPSYPIHPPYAPAPSQVCNYISPAERGWRDYPTLSEIPY
SQSPYTPRWDPGYQFSGSFFSCNTSDPQPSPFTLDTSMRSAEALALSDYRLNVMVFYRDA
LVREVTVNNPDGCQLGPSREGQAFASPETPELVELPHAERASLERGVILWMAPDGLYARR
RCPCRVYWEGAHAPPTDKPNKLEREQNCKLLDTHLFITELQSYALHARPAPCSQVLLFFE
DESAEAQRPRRTFTVQVEPLFARQLLYLSHPSSMNYIRSHELSHLPPEHAISPTQDYHRV
VTHHHNNASQN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcggatgaagagcgcgcgatgacggggggctcaggtaacggaaagttgcgtcag
tggctgatcgagcaggtggacaccggaaaataccctggactcgtgtgggagaacgacgag
aagagcatctttcggattccgtggaagcacgcggggaagcaggactacaacagggatgag
gatgctgcgctcttcaaggcttgggcactattcaaaggaaagttccgggaggggatcgat
aaacctgacccaccaacttggaaaacgcgtcttcggtgtgctcttaacaagagcaatgac
tttgaggaaattgtggaacgcagtcaacttgacatatcggacccctataaagtgtatagg
attattccggaaggatccaaaaaaggttccagatctattgatgattcacagtccaattca
aactcacctagttatccaatacacccaccttatgcaccagcaccttctcaggtgtgcaac
tacatttctccagcagagagaggatggagggattaccccaccctgtctgagatcccttac
agtcagagcccctacactccacgctgggaccctgggtaccagttcagtggctccttcttc
agttgcaatacatctgatccacagccgtcacccttcaccctggacaccagcatgagatcc
gctgaggctctggccctctcagattaccgcttaaatgtgatggtgttttaccgggatgcc
ctggtgcgagaggtaacagtgaataatccagatggctgtcagctaggccctagcagagag
ggacaggccttcgcttcacctgagactccagaactggttgaactccctcacgccgaaagg
gcatctctggagcggggtgttatactctggatggctcctgacgggctctacgcccgccgc
cgctgcccctgcagggtgtactgggagggagctcacgctccacctactgacaaacccaac
aagctggagagagagcagaactgcaaactgctggacactcatctgttcataacagagttg
cagagttacgccctgcacgctcgtcctgcgccatgttcccaagtgctgctattctttgag
gatgagagtgctgaagcgcaaaggcctagaaggacattcacagtccaggttgagccactg
tttgctcgccagcttctctacctcagtcacccaagcagcatgaactacatccgcagccat
gagctttcacaccttccccctgagcacgccatctccccgacccaagattaccacagagtc
gttacgcatcaccataacaacgcctctcaaaattga
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