Pimephales promelas (fathead minnow): 120494282
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Entry
120494282 CDS
T08155
Symbol
zyg11
Name
(RefSeq) protein zyg-11 homolog isoform X1
KO
K10350
Zyg-11 protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120494282 (zyg11)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
120494282 (zyg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
LRR_4
ELMO_ARM
V-ATPase_H_N
LRR_EndoS
BAF250_C
Motif
Other DBs
NCBI-GeneID:
120494282
NCBI-ProteinID:
XP_039549450
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MIHLLDTVDEASPPSLTDLCMTLVSSRLELFCEKRDDGSLSFREPLVFPQELADQLLCKM
STAGLLNDSTVGIFRSCQQFRLRHACIRTARISAEAFHRALCPHRLVELDASRVNADLTI
ADILRGLSSNKTVQEGLQRLVLNGLTMSSLEEPSRRCFSAMQGLRALSVSNVDFYDSGLV
DVCALPRLESLDISNTSVTNLTPLLGLRSRLRYLTMHQLKRLEMTTAQLLAVLSQLEGLQ
HLDISDDKQFTSDVARQLLETSGIFPQLVSLDVSGRKQVTDTAVKAFVEARPGMTFVGLL
ATDAGFSDFLSGEGSLKVTGEANETQICEALRRYSEREGFVREALFHLFSLTHAIEKPRP
DILKLVALGMKNHPATLNVQLAASACVFNLTKQELAFGIPVRLLGNVTQLLLEAMKTFPN
HQQLQKNCLLSLCSDRILQEVPFNRFEAAKLVMQWLCNHEDQNMQRMAVAIISILAAKLS
TEQTAQLGAELFIVKQLLHIVRQKTCQGTVDATLKFTLSALWNLTDESPTTCRHFIENQG
LELFIKVLESFPSESSIQQKVLGLLNNIAEVGELHGELMVQSFLDHICSLLHSPEVEVSY
FAAGILAHLTSRGEKVWTLDMSLRNTLLEQLHSAILKWPTPECEMVAYRSFNPFFPLLEC
FQTPGVQLWAAWAMQHVCSKNAAGRYCSMLLEEGGLRQLEAVITHPEIHGDVLRLAESIL
DSLHRHRTRTGYAGPAKIHTHTEKNIP
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgatccatcttttggacaccgtggacgaggcgtccccgccgtctctgaccgatctgtgc
atgactctggtcagctccaggctggagctcttctgtgagaagcgtgatgacggctctctc
tccttccgtgagccgctggtcttcccgcaggagctggccgaccaactgctctgcaagatg
tccactgcgggcctgctgaacgacagtacggttggaatcttccggagctgccagcagttc
cgcttgcgtcacgcctgcatccgcaccgctcgaatctccgccgaggccttccaccgggcc
ctctgcccccaccgcctcgtggagctggacgcatcacgggtcaacgccgacctcaccatc
gccgacatccttcgaggtctctcgtccaacaaaaccgtgcaggagggcctgcagcggctc
gtcctgaacggcctgaccatgtcctctcttgaggagcctagccgtcgctgtttcagcgcc
atgcagggtttgcgcgctctcagcgtgtccaacgtcgacttttacgactctggcttggtg
gacgtgtgcgcgctgccccgcctggagagtttggatatctccaacacctcggtgacgaac
ctgacccctcttctggggttgaggagcaggctacgctacctcaccatgcaccagctcaag
aggctggagatgaccaccgctcagctgctagctgtgctcagtcagctggagggtttacag
caccttgatatctcggatgataagcagttcacatcagacgtggcgcggcagctgctggag
acttctggcatcttccctcagctggtgtctctggacgtgtctggccgcaagcaggtgacc
gacacagcggtcaaggctttcgtggaggcgagaccgggcatgacctttgttggtctgctg
gccaccgatgctggattctctgacttcctgtctggagagggcagcttaaaggtgactggg
gaagccaatgagacccaaatctgtgaggcgttgagacggtacagtgagagggagggcttt
gttagagaggctctctttcacctcttcagcctcactcatgccatcgagaaaccacgcccc
gacatcctgaagttggtcgcgttggggatgaagaatcatccggccacgttgaatgtgcag
ctggcggccagtgcctgtgtgttcaacctcaccaagcaggaactggcttttggaatcccc
gtgcggctcctggggaacgtcacacagctgctcctcgaagccatgaagaccttccccaac
caccaacagctgcagaagaactgcctgctgtctctctgcagtgatcgaatcttgcaggag
gttcccttcaacaggtttgaagctgccaagctggtgatgcagtggctgtgtaaccacgag
gatcagaacatgcagaggatggccgttgcaattatctccatcctcgctgccaagctgtcc
actgaacaaactgcacaactgggagctgagctttttatagtaaagcaactcctgcacata
gtgcggcagaagacgtgtcagggtacggttgacgccacgttgaagttcacactcagcgct
ctgtggaacctcacggatgaatcccctaccacctgcagacacttcatagagaaccaggga
ctggagctcttcatcaaagtactcgagtccttcccatcagagtcatccatccaacagaag
gtgttgggattactgaataatatcgctgaagtgggggagttgcacggtgagctaatggtt
caaagttttctcgatcatatctgctctctgctgcacagtccagaggtggaggtcagttat
ttcgcagcaggcatcttggcccacctcacctcacggggcgagaaggtgtggaccctcgac
atgtcgctcaggaacacactgctggagcaactgcattcagcgattctgaagtggccgacg
ccggaatgtgagatggtagcgtacagatcgttcaacccttttttccctttactggagtgc
ttccagaccccaggggttcagctgtgggccgcatgggccatgcagcacgtctgcagcaaa
aatgcagcggggcggtactgcagcatgttactggaggagggaggactgcggcagctagag
gccgtgatcacacatcccgaaatccacggcgatgtgctgcgattggctgaaagcatccta
gacagtttacatcgccacagaacacgcacaggatacgcaggcccggcaaaaatacacacg
catacagagaaaaacattccatga
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integrated database retrieval system
