Pimephales promelas (fathead minnow): 120494499
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Entry
120494499 CDS
T08155
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120494499 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120494499 (nup98)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120494499 (nup98)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120494499 (nup98)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120494499 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
120494499
NCBI-ProteinID:
XP_039549605
LinkDB
All DBs
Position
Unknown
AA seq
1823 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTSSTFGQQNAGFGATGGFGSSAFGAANTTGGGLFGATQNKPG
GLFGSSTFSQPVTSSTSSGFGFGAPSGTSNSLFGNTNTGSAGLFSQQNNAFGANKPASFG
TFGTSTSSGGLFGTTNTASNPFGGTSGSLFGASSFTAAPPGTTIKFNPPTGSDTMVKGGV
TTSINTKHQCITAMKEYENKSLEELRFEDYQAGRKGPSNPMAAGTGGLFGPTAAATPSTG
TGLFGSSAPNTGFNFGQNKTSFGTSTGAFGTTTGSLFGQPQQHQQQQQQQQQQQQQQASS
LFKPFGSATTTQNNTFSFGNTNTMGQPNTSTMQGLFGNTAASQAGGLFGNTNTSTAAGFG
TGIFGQTNTGFGNVGTQNLFGNKPAGFGTTTTSTPSFGTGTGLFANKPTLTLGANTNTST
FGFGATGAGGGLFGNKTAATGLGTGLGTGFGGAVGTGQTSLFGNNQNKLGSTLGSMGTFG
TGGFNTGANTLNFGATQQPVALTDPSAAAAQQAVLQQQINALAYSPFGDSPLFRNPLSDP
KKKEERLKPTNPAAQKALTTPTQYKLTPRPATRVRPKALSSSGSSKSQLFDGLDDDEPSL
NNGAFMPRKSIKKLVLKNLNNSSLYNNSVNREVDDLASPSEYPQNGLSLSMDDGETREGT
MERSREDDLEVSKFYTNPITKPIPHGQPSPLLQDTISEFNMRGTASHRNGLEASSEEISL
AEDSIQEERDEELEAQKPPHPAGIVLCRVGYYTIPSMEELGKMLNENGECILENFTVGRK
GYGSVFFPGEVNLTNMNLDEIVYFRRKEIIVYPDDKDKPPVGEGLNRRAEVTLDGVWPND
KTTCCQIKSVERLNEMNYEGRLEAASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDE
EEEAPPTKLDLKKLKTGGPLGIAQLPLNQQQMAPQAQSTGVLELLSRVSELDSDMADITQ
EHPADSVLGEEDGERTSLEENKLRSETPVEHEPVSSSSQIASSMGINPHTLQIMKACLFA
EDDECDLFQEHGSSKLIMDVASPKVLLSGPGRPSIGALLQTKFTSGGGLFPQFPEAPFGG
IPQKLSKSMVSEAPWPSLGPSFLLPAPPPEPTLRTVGARRLGGPVPLEASVTLGKGRLLM
DAALFRGRSFRVGWGPNWTLVHCGDQLSVTETMKDQAAESMSFGFLPKPTKSKQITESLY
KVRMEQVVGLEHKQSAESLALYHRPLEISLKHSTINTEDSCPFIQPARGVDALHGYAEWI
VEVNKETGGGDAGLAHWQQIWTLCAALWGRLGDRDVETEHYSDYQQQLERRRSFSHWLSV
TAAGCIEEEVGRALQRNHVEAVFSYLTGHCISKACKLSQKSGDHRLSLMLSQAVGSQFCR
DLLALQLTDWNRMQTDSFIEEERLRIIALLAGKPVWQSTDSVINVCSELDWKRCVAVHLW
YMLPPTASVADALAKYESAFQGSEEVKRYACPPLPPYVDELELLGLDEEMEETESRKPLY
DICFHLLKLYSDRHYSLQQLLDPSTVTADHLDYRLCWHLWNVLQALNYNHLSTSCQALLH
TSYAAQLESAGFWEMAIFVLLHIPDSGRRESAVREMLNLHCPLEETEESMEKEQFLTEKL
LIPIKWIHQAKAIRACREGDKHREALHLYKAGHWNHCHRLVIQHLASDCIINDNHKYLLE
FLEGLAVPERSVQIQSWDTSGRVYLDYIHVIQTLQDIQQAESPGYALERLHTEVKSLCER
IELLPCSKAKDRLAQSEMAKRVANILRVVLSLQQGGEGTPDPRRIPLCQLAPHIGRLPMP
EDYALEELRSLTQSYLQEYVISH
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaatcttttggtgctccctttgggggagggacaggaggatttgggacttct
tctacatttgggcaacaaaatgctggctttggagcaacaggaggctttggatcttcagcg
tttggggcggcaaacaccacaggaggaggactgttcggggccacccagaacaagccaggt
ggtctctttggctcaagcactttcagtcagcccgtcacctcctccaccagtagtggcttc
gggtttggtgctcctagtggcacgtcaaacagcctttttggaaacaccaacaccggaagt
gcaggactgttttcccagcagaataatgccttcggtgccaacaaaccagcctcgtttggc
acttttggtaccagcaccagtagcggtggattgttcgggacaaccaacacagcatccaac
ccatttggaggaacgtcaggctctttgtttggggcgtcaagtttcactgctgcaccccct
ggcacaacaatcaaattcaatccaccaactggtagtgacacaatggtaaaaggtggtgtg
acaaccagcattaacaccaaacaccagtgcatcactgcaatgaaggaatatgagaacaaa
tccttagaggaattgaggtttgaggattaccaggctggtaggaagggtccttccaaccct
atggcagctggtacaggtggtctctttggaccgacagccgcagctactcccagtaccggc
actggactctttggctcctccgctccaaacactggcttcaacttcggccagaacaagact
tcattcggcacgagcaccggggcatttgggacaaccacaggaagtttgtttggtcagccg
cagcagcatcaacagcagcaacaacaacagcagcagcagcaacagcagcaagcttccagt
ctcttcaaaccatttggatcagccaccaccacccaaaacaacactttctccttcggcaac
accaataccatgggccagcccaacaccagcaccatgcaggggctgtttggcaacacggct
gcctctcaggccggaggactttttggaaacactaacacgagtactgccgcaggctttggc
acaggaatctttggtcaaactaacaccggatttggaaatgtgggtacacagaatcttttt
ggtaataagcctgcaggatttggcaccaccaccactagcacaccctcctttggtacaggc
accggtctgtttgcaaataagcctacactcactctaggggcaaacacgaacacctcaacc
tttggattcggtgcaactggtgctggtgggggtctttttgggaacaaaactgctgcaaca
ggactgggaacaggattgggaactggtttcggaggagctgtagggactggccagacgtca
ttgtttgggaacaaccagaacaagctgggctccaccttggggtcaatgggcaccttcggg
actggaggcttcaacaccggagccaacactctgaattttggtgctactcaacagcctgtg
gctctgactgacccgagtgcagcagccgctcagcaggccgtcctccagcagcagatcaat
gcattggcctactctccttttggagactcacccctcttcagaaacccactgtcggacccc
aaaaagaaggaagagcgtctcaagcccacaaatccagctgcccagaaagccctgactacc
cccactcaatacaaactgacccctcgtcctgccacccgtgtgcgtcccaaagctctttcc
tcctctggctcctccaaatctcagctcttcgatgggcttgatgatgatgaaccctctctt
aacaacggagccttcatgcctaggaagagtataaagaaacttgtgttgaagaacctgaat
aacagcagtctgtacaacaactctgtgaacagagaggttgatgatttagcttccccttca
gagtacccacagaatggactcagtctgagtatggatgatggcgagactagagaaggcact
atggagagaagtagggaggatgatctagaggtttccaagttctacaccaacccgatcacc
aaacccattccacacggccagccaagccccttgctacaggacaccatctcggagttcaac
atgcggggaactgccagtcatcgcaatggcttggaggccagcagtgaggagatctctctg
gctgaggattccattcaggaggaaagagatgaggagctggaggctcagaaacctcctcac
ccagctgggatagttctttgccgtgtaggctactacaccatcccatccatggaagagctg
ggaaagatgttgaatgaaaacggggagtgtattttggagaacttcactgttggcagaaag
ggctatgggtccgttttcttccctggtgaggtgaatcttaccaacatgaacctggatgag
attgtgtacttccggcgtaaggagataatcgtgtaccctgatgacaaagacaagcctcct
gttggagagggactaaacagacgtgctgaagtgactctagatggtgtgtggcccaatgac
aagacaacgtgctgtcagatcaagagtgtagagaggctgaatgagatgaactacgagggc
cgactcgaggcagcctcgcgcaaacaaggcgcacgcttcttggagtaccgacccgaaact
ggatcctgggtctttgaggtggcccacttctcaaagtacggcctgcaggactctgatgaa
gaagaggaagcccccccgaccaagctggacctgaagaagctgaagaccgggggccccctt
gggatcgcacagcttccactgaaccagcagcagatggcgccacaggctcagagtactgga
gtacttgagctgctcagccgcgtgtcggagttggacagtgacatggccgacattacccaa
gagcaccccgcggacagtgttttgggtgaggaggatggagagagaacgtctttggaggag
aacaagctgagatctgagactcctgtcgagcatgagcccgtgtcctcatccagccagatc
gcttcctcaatgggcatcaaccctcataccttacagattatgaaggcctgtctctttgca
gaggacgatgaatgcgacttgtttcaagagcatggttcttcaaagctcataatggatgtg
gcttcccccaaagttttgctttctggacctggtcggccatcaatcggagccctgttacaa
acaaagttcacctcaggtggagggctttttccccagttcccagaggctccttttggtgga
atacctcagaagcttagcaagtcaatggtgtctgaagccccatggccatcattgggtcca
tccttcctgttgccggcccctcctccagaacctacgcttcggaccgtcggggcacgtagg
ctaggtgggccagttcctctggaggcctcggtaacactagggaaaggccgtttactgatg
gacgcggctctgttcagaggccggtctttcagagtgggctggggtcccaactggacactg
gtgcactgtggagatcaacttagtgtcacagaaacaatgaaggatcaggcagcagagagc
atgagttttggcttcttacccaaaccaaccaagagcaaacagatcactgaaagtctgtat
aaggtgcgtatggagcaggtggtcggcctggagcacaagcagtcggccgagagccttgct
ctttaccacaggcctctggagatcagtctaaagcacagcacgatcaacaccgaggactcc
tgtcctttcattcagccagcgagaggagtggacgctctgcatggttatgcagaatggatt
gtggaggtcaacaaagagacaggtggaggggatgctggcctggcccattggcagcaaatc
tggactttgtgtgccgccctgtggggtcgtcttggcgaccgagatgtggagactgagcac
tactcggactaccagcagcagctcgagaggcggaggagcttctcgcactggctctctgta
actgcagccgggtgtatagaggaggaggtgggccgggctcttcagcgcaaccacgttgag
gctgttttcagttaccttaccggtcactgcataagcaaggcctgcaaactgtcccagaag
agtggggaccatcgcctttcactgatgttgtctcaggctgtgggctctcagttttgtaga
gatctactggctctgcagctcaccgactggaacaggatgcagacagactccttcatagaa
gaggagaggctgcgaatcattgctttgcttgcaggcaaaccagtgtggcagtcgactgac
agtgttataaacgtgtgctccgagctggactggaagcggtgtgttgctgttcatctctgg
tacatgctgcctcccactgcctctgtagcggatgctctcgccaaatacgagtctgccttt
cagggttcagaggaagtgaaaaggtatgcttgccctcctttacctccctatgtagatgaa
ctggagttgttgggtttggatgaagagatggaagagactgaatccagaaagccactgtat
gacatctgcttccacctacttaaactgtacagtgacaggcattacagcctacaacagctc
cttgatcccagcaccgtaactgctgatcatctggattaccggctgtgctggcacctgtgg
aacgtgctgcaggctcttaactacaatcacctgtccacctcatgccaggccttgctgcac
accagctatgccgcccagctggagagtgcgggattttgggagatggctatcttcgtgctg
ctgcacatacctgactctggacgtagagagagtgcagtgcgggagatgctcaacttacac
tgcccccttgaggagacagaagagtcaatggagaaggagcaatttcttacggaaaagttg
ctgatccccatcaagtggatccatcaggccaaggccatccgtgcctgcagagagggagat
aaacatcgtgaagccttgcacctctacaaggccggccactggaatcactgccatcggctg
gtcatccagcacctggcctcagactgcataattaatgataatcataagtacctgctggaa
ttcctggaggggttggcagtgccagagcgcagtgttcagattcagagctgggacacgtct
ggacgggtctaccttgattacatccatgtcatccagacactgcaggacatccaacaggct
gaaagcccaggttatgcgctggagcgcctgcatacagaggtcaagtctctctgtgagagg
atagagctcctcccctgctccaaagctaaagacagacttgcccaatcagagatggccaag
cgtgtggctaacatcctccgagtggttttgagtctccagcagggtggtgaaggcaccccg
gatcccagacgcatccctctttgccagcttgctccacacattggacgtctacccatgcca
gaggactacgctttagaggaactccgcagccttactcagtcgtacctgcaagagtatgtt
atcagtcactga
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integrated database retrieval system
