Pimephales promelas (fathead minnow): 120494504
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Entry
120494504 CDS
T08155
Symbol
cadm1a
Name
(RefSeq) cell adhesion molecule 1a isoform X1
KO
K06781
cell adhesion molecule 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120494504 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120494504 (cadm1a)
Cell adhesion molecules [BR:
pprm04515
]
Immunoglobulin superfamily
Nectin family
120494504 (cadm1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_5
C1-set
C2-set_3
FAS_meander
DUF6941
MGC-24
Motif
Other DBs
NCBI-GeneID:
120494504
NCBI-ProteinID:
XP_039549617
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MAFWGCIGERPPSNYFFFSFFLSPFHTGAAQFPVQSQNLMADNISVVEGETATISCRVKN
NDDSVIQLLNPNRQTIYFKDVRPLKDARFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYT
DPPQEAYADITVLIPPGNPIIESREDIVSEGNETEITCTSMGSKPAATIRWMKGDKELQG
KSKVENTYDRMFTVTSWLRFTVTREDDGVPVVCIVDHPAVKDFQAQKYLEVQYKPEVKIV
VEFPSGPIREGENLELTCQAKGKPEPQQVNWVRVEDDVPSHAVITGSDLFIENLNKSFNG
TYRCVASNSVGEAYDDYILFVRDALTTTPKPTTTTTTTTTISATTSPPDIIQDAAPSTEA
AAHDSQAGTEAQRSLDHAVIGGVVAVVVFAMLCLLIVLGRYFARHKGTYFTHEAKGADDA
ADADTAIINAEGGHNNSDEKKEYYI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcattttggggatgtattggtgaaaggcctccttctaattattttttcttttctttt
ttcctctccccctttcacacaggagctgctcagtttccagtccaaagccagaatctcatg
gcggacaacatctcggtagtggagggggagacagccaccataagctgtcgagtcaaaaac
aatgacgactcggtcattcagctcctcaaccccaacagacagaccatatacttcaaagat
gtcagacccctgaaagatgctcgattccagctggtcaatttctcagacaacgagctgcgt
gtgtcgttatccaacgtgtcactctcagacgagggaagatatgtgtgccagctctataca
gaccccccacaggaagcctacgccgacatcactgtgctaatcccaccaggaaacccaatc
atagagtcccgtgaggacatcgtcagcgagggcaacgagacggagataacctgcacctcc
atgggcagcaaacccgccgcaacgatcagatggatgaaaggagacaaagagctacagggc
aagtctaaagtggagaacacgtacgacaggatgttcactgtgacgagctggctgaggttt
acggtcacgagagaggatgacggggttcctgtggtttgcattgtcgaccatccagcggtc
aaggacttccaggcgcagaagtacctagaagttcaatataaacctgaggtaaagatcgtg
gtggagtttccttcgggcccgattagagagggtgaaaatctggagctgacgtgccaggct
aaaggcaaaccagagcctcaacaggtgaattgggtgagggtcgaggacgacgtgccatct
cacgcagttatcaccggctcagatctcttcatcgagaacctaaacaagtccttcaacggc
acttaccgatgtgtggcgtccaactctgtgggtgaagcctatgatgactacatccttttt
gtgcgtgatgcccttaccacaacccctaaacccacaaccaccaccaccaccaccaccacc
atctccgccacaacctcccctccagacatcatacaagacgctgcgcccagcactgaagcc
gcagctcacgattcacaagcaggaacagaagcacagagatcgttggaccatgcggttatt
ggaggggtggtggccgtcgtggtctttgccatgttgtgtcttctcatcgttttggggcga
tactttgcaagacacaaaggcacctacttcacacacgaagccaagggggcagatgacgcg
gcggacgctgacacggccatcatcaacgccgaagggggccacaacaactcggacgagaag
aaggaatactatatctga
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