Pimephales promelas (fathead minnow): 120494510
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Entry
120494510 CDS
T08155
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120494510 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120494510 (myo5b)
04131 Membrane trafficking [BR:
pprm04131
]
120494510 (myo5b)
03029 Mitochondrial biogenesis [BR:
pprm03029
]
120494510 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120494510 (myo5b)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120494510 (myo5b)
mRNA cycle factors
P-body specific factors
120494510 (myo5b)
Membrane trafficking [BR:
pprm04131
]
Others
Actin-binding proteins
Myosins
120494510 (myo5b)
Mitochondrial biogenesis [BR:
pprm03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120494510 (myo5b)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120494510 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
ANT
Ac76
Motif
Other DBs
NCBI-GeneID:
120494510
NCBI-ProteinID:
XP_039549631
LinkDB
All DBs
Position
Unknown
AA seq
1812 aa
AA seq
DB search
MSVTELYSKYTRVWIPDPDEVWRSAEIVKDYKEGDSVLHLKLEDESTLEYSIGPKDNPLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLQIYG
EEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSANDTSIEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFDRRYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASSSLPEFKDLALSSAEDFTFTSLGENIFIEGVN
DAEDLVKTREALTMLGVKEAHQMSIFKVIASILHLGNVEIVSERDGESCHINRDETHLHH
FCQLLGIEQEQMEHWLCRRKLVTTAETYVKNMPYAQAVNARDALSKHIYAHLFDWIVEHV
NKALHTSTKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYSKHSSSGHFEK
PRMSNRSFIVVHFADKVEYQCDGFLEKNRDTVYEEQINILKASKFQLVADLFHDGKDVPP
SSAASKTSRINVRAAKPALKGHNREHRKSVGTQFRNSLHLLMETLNATTPHYVRCIKPND
FKESFVFDSSRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLMTKKDLTIGDKK
QVCKNLLETLVKDPDKFQFGKTKIFFRAGQVAYLEKLRADKFRYACIKIQKTVRGWLQRI
RYRKIRKSAITLQRYGRGYLARRHAEMLRLTRATLICQKQYRMVKVRKDYLRIRRAVITI
QAFARGMFIRRLYQEFLLHHKAIIIQKTVRGWLVRKKFLHARYSAIVIQCFYRRVCAIRQ
LKQLKIEARSAEHFKNLNVGMENKIVQLQKKMDNQSQDYKIQKEQLAIANTALGSEVNKL
QKELETLRIRQAAGTPVASLQEELEKLRAELQEANAQRKQIEEEFSNEKQGLQQRVQELE
KENTLLKKEKEEMNRKIQSSTQGQAVDASQKESRLQVELDDERQRYQNLVKEYSRLEQRY
ENLQEDMSSMKFHPGHRRIPSNQSSLGSDSNYPSISMSEAGDTDDTIQQVEEMGIEKAAM
DLSVFMKLQKRVRELEQERKRLQTNLEKVEELSQRKGNEPRSSTSEEEINADLAYNSLKR
QELETENKKLKNDLNELRKAVADRASENNSSNELQEGYNLLLNQLKAANEELDVRKEEVL
MLKTQIVNTRQSENINHINSNDVSEWTDNKKPVDAEDIVNVPDSKKLLEAQLQTQSRQHK
DELEALHTQVELLKDNLEKKQDMLNHFSTLSPEALVEFSVQQEITRLTNENLDLKELVEK
LEKNEKKLKKQLRIYMKKVQELEVSQATRSRPELTRQVTVQRKEKDFEGMLEFYKEDEAL
LVKTLITDMKPNAVSATVPCLPAYILFMCIRHADYINDDQKVHSLLTATINAIKRVLKKN
NDDFEMTSFWLANTSRLLHCLKQYSGDEAFMTQNSPKQNEHCLKNFDLAEYRQVLSDLSI
QIYQQLIRVAENIMQPMIVSAMLESESIPSLAGVKPMGYRNRSSSMDCESGGPAGYTLQA
LIRQLGQFYTTMADHGLDPEIGQQMVRQLFYSINAVTLNNLLLRKDVCSWSTGMQLRYNI
SQLEEWVRGKNLHHGGTIATMEPVIQAAQLLQVKKKTSQDAEAICSLCTALSLQQIVKIL
NLYTPLNEFEERVTVSFIRDIQNRLQDRIEINQLLVDTKYTFPVLFPYTPSALTLEAIHI
PASLNLDFLTRV
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaaccgaactctactctaagtacacccgggtttggatccctgacccagatgag
gtctggaggtccgctgaaatcgtcaaggattataaggagggagactcggtgcttcacctt
aaattagaagatgaatcgacattagaatattcaattggtcccaaagacaatcctcttcca
ttccttcggaatcctgatattctggtaggagagaatgacctcactgctctcagctacctc
cacgagcctgctgtgctccacaacctaaaggtccgcttcctcgagtccaatcacatttac
acttactgtggaattgttctggtggccatcaacccgtacgagcaactgcagatctatgga
gaagaagtcatcaatgcgtacagcggccagaatatgggggacatggaccctcatatattt
gccgtggcagaggaagcgtacaaacagatggccagagatgagaagaaccagtcgataatc
gtgagtggcgagtctggagccggtaaaaccgtttcggcaaagtatgccatgcgctttttt
gccacagtgggaggttcagcaaacgacaccagcattgaagagaaagtactggcctccagc
cccatcatggaggccattggaaatgcaaaaaccacccgcaatgacaacagcagccgcttt
gggaaatacattgagattggctttgataggagatatcacatcatcggtgccaacatgcga
acgtatctgcttgagaagtccagagttgtatttcaggctgaggatgagaggaactaccac
attttctaccagctctgtgcttcatcatctctgccagagtttaaagatcttgccttgtcc
agcgcagaagactttaccttcacgtctctcggtgagaacattttcattgagggtgtgaat
gatgctgaggaccttgtgaagacaagagaagcacttacaatgcttggtgtgaaagaagcc
catcaaatgagcatctttaaggtaatcgcctccatcttgcacctggggaacgtggaaatt
gtgtcagagagagatggagaatcctgccatatcaacagagacgaaacccatctgcatcat
ttctgtcagctgctcggtatagaacaggagcagatggagcactggctgtgccgcaggaag
ctggtgaccactgccgagacctacgtgaagaacatgccatacgcccaggctgtcaacgcc
cgagatgccctgtccaaacacatttacgcccatctctttgactggattgtggagcacgtc
aataaggccttgcatacatccactaaacagcactccttcatcggggtgctggatatctac
ggatttgaaacattcgagatcaacagctttgagcagttctgtattaactatgccaatgag
aaacttcagcaacagttcaactcgcatgtgtttaaactggagcaagaagagtatatgaag
gagcagattccctggacgcttattgatttctatgataaccagccgtgcattgacctcatt
gaagccaagcttggtatcctggaccttcttgatgaagagtgtaaggttcccaaaggaaca
gatcaaaactgggcacagaagctgtacagcaagcattcaagcagcgggcatttcgaaaag
cctaggatgtccaacaggtctttcattgtggtccactttgcagataaggttgaatatcag
tgtgacggcttcctggagaagaacagagacactgtttatgaggagcagataaacatcctc
aaggccagtaagttccagctggttgcagatctcttccatgatgggaaagatgttccccct
tcctcagccgccagcaagacctccaggatcaacgtccgggccgccaaacccgctctaaaa
ggccacaaccgtgagcacaggaaaagcgtgggcacccagttcaggaactctttacatctt
ctgatggaaacgctgaatgctaccacccctcattatgtgcgctgcattaagcccaatgat
ttcaaggaatcctttgtatttgattctagtagagctgttcagcaactgcgagcatgtgga
gttctcgagaccattcgcatcagtgccgctggctatccatccaggtggacctatccagat
ttcttcagcagatatcgggtgctcatgacaaaaaaggacctgactattggggataagaag
caggtttgtaagaacctgctggagaccttggtcaaggatccagataagtttcaatttgga
aagacaaagattttcttcagggcagggcaggtggcctatctggagaagctcagagccgat
aagttccgctatgcctgcattaagatccagaagaccgtgcgaggatggctgcagagaatt
aggtaccgcaagatccgcaaatctgccatcactctgcagagatacggccggggttacttg
gcacgcagacatgcagagatgcttcgcctgacccgagcaacacttatttgtcagaagcag
taccgaatggtaaaagttagaaaggactatctgaggatccgtcgggctgtgatcaccatt
caagcgttcgctcggggcatgttcatacgcaggttatatcaggagttcctgcttcatcac
aaagccattatcatacagaagaccgtccgtggttggcttgtgaggaagaagtttctccat
gcccgatattctgctattgtcatccagtgtttttaccgtcgcgtatgtgccattcgtcag
ctcaaacagctcaagatagaggcccgttcggccgaacactttaaaaacctcaatgtcgga
atggagaacaagatcgtgcagcttcagaagaagatggataaccagtcgcaagattataaa
attcagaaagagcagctggctattgccaacacagctctgggatcagaggtcaataagctc
cagaaggagcttgagacccttcgtattcggcaggctgctggcactccggtggcatcactg
caggaagagcttgagaaattgagggcggagcttcaggaagccaacgcccaaaggaagcag
atagaggaggagttcagcaacgagaagcaagggctccaacagagggtacaggagctggag
aaagagaacacgcttttgaaaaaggagaaagaagagatgaaccgcaaaatccaatcctcc
actcagggtcaggcagttgatgcatctcagaaagagagccgtctgcaggtggaactggat
gacgagaggcaacgatatcagaacctggtgaaagaatattccagactggagcagagatac
gaaaacctgcaggaggacatgtcctccatgaagttccatcccggacaccgaaggatcccc
tctaaccagagcagcctgggctcggactccaactacccctccatcagcatgtcagaggca
ggagacactgatgacaccatccagcaggtggaggagatgggcatagagaaggccgccatg
gacctcagcgttttcatgaaattacagaagcgtgtgcgagagctggagcaggaaagaaag
aggctgcagaccaatctagaaaaagtagaggaactgagccaacgcaagggtaatgagccc
aggagctccacgtcagaggaggaaataaatgcagacctggcttacaacagtctgaagcgg
caagagctcgaaacggagaataagaagttgaagaatgacttgaacgagttgaggaaagcg
gtggccgacagggcctccgagaacaactcgtccaatgagcttcaagagggctacaacctg
ctgctcaatcaactcaaagcagccaatgaggagctggatgtgcgcaaggaggaggtccta
atgcttaagacccaaattgtgaacacgagacagtcggagaacataaaccacattaattcc
aatgatgtatcagaatggaccgacaacaagaagcctgtggacgcggaggacatagtgaat
gtacctgattcaaagaagttgctggaggcccagctgcagacacagtctcgacagcacaag
gatgagttagaggctctccacacacaggtcgaactgctgaaggacaatctggagaagaag
caggacatgctgaaccacttctccacgctttctcctgaagctcttgtggagttcagcgtg
cagcaggaaatcacacgcctcaccaacgaaaacctggatctaaaggaacttgttgagaag
ttggagaagaacgagaagaagttaaagaagcagttgagaatctatatgaagaaagtgcaa
gagctggaagtttctcaggccactaggagcagaccagagctgactcgtcaggtcacagta
caaaggaaagaaaaggactttgaaggcatgctggagttctacaaagaagatgaggccttg
ctggtcaagactttgattactgacatgaagcccaatgccgtgtcggccactgtcccctgc
ctcccggcctacatccttttcatgtgcattcgtcatgctgactacatcaacgatgaccag
aaagttcattcgctccttactgcgaccatcaatgccattaaaagggtcctgaaaaaaaac
aacgatgactttgagatgacctctttctggctggcaaataccagtcgactcctgcactgt
ctgaagcagtacagcggggacgaggcatttatgacacagaacagtcccaagcagaacgag
cactgcctgaagaactttgaccttgcggagtatcggcaggttctgagtgacctttccatc
cagatctatcagcagctcatcagagtggcggaaaacatcatgcaacccatgattgtgtct
gcaatgcttgagagcgagagcatccccagcctggccggagtgaagcccatgggctacagg
aaccgctcctctagtatggactgtgagagtggaggtccggcgggctacacgctgcaggct
ctaatcagacagctgggacagttttacaccaccatggcagaccacggcctggaccctgag
atcggccagcagatggttcgccaactcttctactccatcaatgcagtgaccctcaataac
ctactgctgcgcaaagacgtctgctcctggagtaccggcatgcagctcaggtacaacatt
agtcagttggaggaatgggtgagaggtaagaatctgcaccatggtggaactatagccacc
atggaaccagttatccaggccgcccagctgttgcaggtgaagaagaagacctcccaagat
gcagaggccatttgttcactctgtaccgccctaagcttacagcagatcgtgaagattctg
aacttgtacacgccactcaatgagtttgaggaacgagtcactgtgtctttcataagagac
atacagaatcgcctccaagatcggatagaaatcaaccaactgctggtagacacaaagtac
accttccctgtgctcttcccctacactccttcagcgctcactctggaagccatacacatc
cctgcctccctcaacctggacttcctcacgcgggtctga
DBGET
integrated database retrieval system
