Pimephales promelas (fathead minnow): 120494524
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Entry
120494524 CDS
T08155
Symbol
capn5b
Name
(RefSeq) calpain-5 isoform X1
KO
K08574
calpain-5 [EC:3.4.22.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120494524 (capn5b)
Peptidases and inhibitors [BR:
pprm01002
]
Cysteine peptidases
Family C2: calpain family
120494524 (capn5b)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
C2
Motif
Other DBs
NCBI-GeneID:
120494524
NCBI-ProteinID:
XP_039549654
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MFSSVKAFEGQHYSTLKRQCLQSGALFEDPLFPSVDESLFYLGNRIGRVHWKRPGELCDD
PHLFVDGISAHDLHQGQLGNCWFVAACTSLASRESLWQKVIPDWKEQEWDPEKEDSYAGI
FHFRFWRFGDWVDVVIDDRLPTVDNQLVYCHSNDSNEFWSALVEKAYAKVYGCYEALDGG
NTADALVDFTGGVSEPMDLLEGQFAQDEIGRNQLFERVLKVHNRDGLISCSIRATTIEDM
EARLECGLVKGHAYAVTDVRKVRLGHGLLAYFKSEKLQMIRMRNPWGEKEWSGPWSDSSE
EWKKVSKSEREKLGVTVQDDGEFWMNFEDFCHYFTDLILCRLINTSYLSIHKTWEEEVMR
GSWTHRDDPLRNRSGGCINHKATFLQNPQYVFDVRKVEDEVLICLQQKERRATPKEGKGE
NLAIGFDIHRVELNRKYRMHTAQQKVAGSIYINSRCVFLRKELKEGRYVIIPTTFDPGQQ
GEFLLRVFTDVPSDCKELTLDEPPQTCWTGICGYPQLVTQVHVLSADGLQGQDANGELHR
LISHKTRSDFYTGASDPYVIITCEGEKVRSPVYKDTRCPSFDIKGIFYRRKPKEGIHIEI
YNKNVIVDTFLGQVTLFTDPNDRQEQHTVYLKDKGSRQDNNLPGTVTVRVITCTTLTNI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgtctgtgaaggcctttgaggggcagcattactccaccctcaagaggcagtgt
ctacagagtggagcgctgtttgaggacccactgtttccgtccgtggacgaatcgctcttc
tacctgggtaacaggattggccgtgtgcactggaaaagacctggggagctgtgcgatgat
cctcacttgtttgtggatgggatcagtgcccatgatctgcaccaagggcagctgggaaac
tgctggtttgtggcagcctgcaccagcttggcttctagagagtctctgtggcagaaagtt
attccagactggaaggagcaggaatgggatccagagaaggaagactcttatgcaggaata
ttccacttccgtttctggcggtttggggattgggtggacgtggtgatcgatgaccgtctc
cccacagtggacaaccagctggtgtactgccattcaaatgatagcaatgagttctggagt
gcccttgtggaaaaagcctatgccaaagtttatggttgctatgaagccttggatggtggg
aacacggccgatgccctagtggactttactggtggcgtgtcagaacctatggaccttctg
gagggccagtttgctcaggatgaaatcggcagaaaccagctctttgaaagagtgctcaag
gtccataatcgagatggccttatcagctgctctatcagggcaaccacaatagaggacatg
gaggcaagactggaatgtgggttagtgaaaggacacgcatatgcggtgaccgacgttcgc
aaggttcgactgggacatggccttctggcgtatttcaagtcagaaaagctacaaatgatc
cgcatgaggaacccgtggggcgagaaggagtggagtggaccctggagtgacagctcagag
gagtggaagaaagtgagcaagagtgagagagagaaactgggcgtcactgttcaggatgat
ggagagttttggatgaactttgaggatttctgtcactacttcaccgacctgatcctgtgt
cgcctgataaacacatcttacttgagcattcataagacctgggaggaggaggtgatgagg
ggctcctggacccaccgagacgacccgctccgcaaccgctccggaggctgcattaaccat
aaagccacttttcttcaaaacccacagtatgtttttgatgtgagaaaagtggaagatgag
gtgctgatctgcctgcagcaaaaggaacgcagagctactcccaaggagggcaaaggcgaa
aacctggccattggatttgacatccatagggtggagttgaacagaaaatacagaatgcac
acagctcagcaaaaggtcgcagggtcgatctacatcaactctcgctgcgtctttctgagg
aaagagctgaaggaggggcgttacgtcatcatccccacaacctttgaccctggtcagcaa
ggagagttcctgctcagagtcttcactgatgtgccttcagactgcaaagaattaacactg
gacgagcctcctcagacatgctggactgggatttgcggctaccctcagctggtcacccag
gtgcatgtgttaagtgccgacggcttgcagggccaagatgccaatggagagctgcaccgc
ttgatctcccacaagacacgctctgacttctacacaggagcctctgacccatatgtgatc
ataacctgtgagggggaaaaagttcgctcccccgtgtacaaagacacacgctgccctagt
tttgatattaagggaatattctaccgcagaaaaccaaaggaaggcattcacatcgagatc
tacaataagaatgtgattgttgacaccttcctgggtcaggtgaccctctttactgaccct
aatgaccggcaagagcagcacacagtctaccttaaagacaagggtagtcgccaagacaac
aaccttccaggcacggtcactgtgcgggtgatcacctgcaccactttaaccaacatctga
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