Pimephales promelas (fathead minnow): 120494530
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Entry
120494530 CDS
T08155
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120494530 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120494530 (sart1)
04121 Ubiquitin system [BR:
pprm04121
]
120494530 (sart1)
Spliceosome [BR:
pprm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
120494530 (sart1)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120494530 (sart1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
120494530
NCBI-ProteinID:
XP_039549667
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MGSSKKHKEKEKDRDPEDRHREHKKHRHKDRDKDKEKDRDREKRKRSRSRERSSRGSERD
RSGRAEKSNAEPRVKKERLDPAFEDNSEPGPKSASGDASLSIEETNKLRAKLGLKPLDLN
ENKKETGTKEEPLVAETINPVHIKQQAEIREKLAALKEKRLLNKKLGKVKALGDEEPWLD
DTAAWVERSRKLAKEKELAEKRAKLLEEMDEEFGVSNLVEQEFAQDKRDSYGSRHLKGLK
VQHKMDSFREGETVVLTLQDKGVLEEEEDVLVNVGLVDKEKAEKNVELKKKKPEYKPYEE
EESVDDMLVFKPKSVLSKYDEEIEGEKKKSFRLSSGGFVGGERERELQAIRENLHNQAQS
LDMPSLSIASEYYTPQEMVGFKKTKRKVKKIRKKERAGDLLIDDTRSTDFGSRSRGRGRR
QDEQEEEGAEPGHVSLESSSKPRDVLQQSDDIRMADMDISDEEDFVSPDPTAFEEDEAEQ
ELQKQLEKQRKLRQKQMLKDSGERVAEHMKQIEMAEDENDPDKKNNIVFNATSEFCRTLG
DIPTYGLSGNREDQEDIMDFEKDVEKEGGGQSDSDMDDNVGWSTVNLDEEKVQADFSTAS
TTILDEEPIVNSGLSAALLLCKNKGLLDTQMLKIARVKNPKPVLANDNYCIEDKMNIDDK
YSRREEYRGFTQDFKEKDHYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKTE
RRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANTITK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgggttcatcaaagaaacacaaagaaaaggagaaagaccgggatcccgaggatcggcac
cgtgagcacaagaaacaccgtcacaaggatcgagacaaggacaaggagaaggaccgagat
cgagagaagagaaagagatcccgatccagagagaggagcagccgaggatcagagagagac
agaagcggtagagcagagaagagcaatgcagagccacgagtcaagaaagagaggcttgat
cctgcttttgaggacaacagcgagccaggtcccaaatctgctagtggtgatgcttcactc
agcattgaagagaccaataaactgagggccaaactaggtttaaaaccccttgatctcaat
gaaaacaagaaagagactggaaccaaggaggagcccctcgtggctgagaccattaatcct
gtccacatcaaacagcaggctgagattagagagaaactggctgctctcaaagagaagcgt
ctgctcaataagaaactgggaaaggtgaaggcgcttggggatgaggaaccatggctggac
gacacagcagcctgggtagagaggagtcgcaaactagccaaggagaaggagttggcagag
aagagggccaaactcctagaggagatggatgaagagttcggtgtgagcaatctggtcgag
caggagtttgcacaggataagagggactcgtacggctcgcgccatctcaaagggctcaag
gttcaacacaagatggactctttcagagagggagaaacggttgtcttaactctacaagac
aaaggtgttctggaggaggaggaggacgtgctggtgaatgtgggtttggtggacaaagag
aaagcagagaaaaatgtggagctgaagaaaaagaagccagaatataaaccttatgaagaa
gaggagagtgtggatgacatgctcgttttcaagccaaagtctgtgctgtccaagtacgat
gaggagatcgagggagagaagaagaagagtttcaggctgagctctggaggttttgtcggg
ggtgagagagagcgagagctgcaggccatcagagaaaacctgcacaatcaggcccagtct
ctggacatgccctctctcagcatcgcctcggaatactacacgccacaggaaatggttggc
tttaagaagaccaaacgcaaagtcaagaaaatcagaaagaaggagagggctggtgacctc
ttgattgacgacactcgaagcacagattttggctccaggtctcgaggtcgaggtagaagg
caagacgagcaggaggaggagggggcggagcctggacatgtttctttggaaagcagcagc
aagcccagggatgtcctccaacagtcggatgacattagaatggccgacatggacattagt
gatgaagaggactttgtctctccagatcctactgcatttgaagaggatgaagccgagcag
gagctccagaaacaacttgagaaacagaggaaactcaggcaaaagcagatgctcaaagac
tcaggagagagggtggctgagcacatgaagcaaattgagatggcagaagacgagaatgac
ccagacaaaaaaaacaacattgtctttaatgccacctcagaattttgtcgtactcttgga
gacatcccaacctacgggctgtcgggcaaccgagaggatcaagaggatattatggacttt
gaaaaggatgttgagaaagaaggaggtggacagtcagactcggatatggatgacaacgtg
ggctggagcactgtcaacctggacgaggagaaagtccaggcagatttctcaacggcgtcc
acaactattctggatgaagagcccattgtaaactctggtctctctgctgctctgcttctg
tgcaaaaacaaagggttgttggacacacagatgctgaagatagctcgtgtcaaaaacccc
aaaccagttctggcaaatgataactactgcatcgaagacaagatgaatattgatgacaag
tacagcaggagggaggagtacagaggcttcactcaggattttaaggaaaaggatcactac
aagcctgatgtcaagattgaatatgtagatgaatctggccgcaaactgacccctaaagag
gctttcagacagctatcccatcgcttccacgggaagggttctggcaagatgaagacggaa
cggagaatgaaaaagcttgaggaagaggcgctgctgaagaagatgagcagcagtgacact
cctctgggaaccgtcgctcttctgcaggaaaagcagaagtcccagaaaactccttacatt
gtgctgagtggcagtgggaagagcatgaatgcgaacaccataacaaagtaa
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integrated database retrieval system
