KEGG   Pimephales promelas (fathead minnow): 120494569
Entry
120494569         CDS       T08155                                 
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120494569 (rbm22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pprm03041]
    120494569 (rbm22)
Spliceosome [BR:pprm03041]
 Complex B
  Other components
   Prp19-related factors
    120494569 (rbm22)
 Complex C
    120494569 (rbm22)
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus Nup35_RRM_2 RRM_occluded zf-CCCH_2 zf-CCCH RRM_3 RRM_YTH1 zf-CCCH_4 zf-CCCH_10 RRM_PARP14_3 zf-CCCH_12 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 120494569
NCBI-ProteinID: XP_039549738
LinkDB
Position
Unknown
AA seq 424 aa
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQN
MEREIANSDGTRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDVPEDKSITTLYIGGLG
ENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKSFNKLIINGRRLNV
KWGRSQAARGKEKDGVTESGIRLEPVPGLPGALPPPPVSDEDASTNYFNLPPTSSPAVMN
LGLPPPPGVAMPPPPGFGPPMFHTMDPMAPSMPPPMGMRPPGQVHYPSQDPQRMGAHASR
HGGP
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggcgacgtcgttaggctccaacacttacaacaggcaaaactgggaggattcggatttt
cccatcctctgtcaaacatgcttgggagaaaacccttatatccgcatgaccaaagagaaa
tttggcaaggagtgcaagatctgtgcgcgtcccttcacggtgttccgctggtgtcccgga
gtcaggatgcgctttaagaagacagaagtgtgtcagacctgcagtaaaatgaagaacgtc
tgtcagacctgcctcctggatctggaatatggcttgccgattcaggttcgtgacactggg
ctgtccgttaaagatgaagtaccgagatcggacgtgaataaggagtattacactcagaat
atggagagagagatcgctaactctgatggcacgagacctgtggggctgcttgggaaggcg
ccgagcagcagcgatatgctgctgaaactggctcgtaccacgccatattacaagaggaac
agacctcacatctgttccttttgggtgaaaggggagtgtaagagaggagaagagtgtccg
tacaggcacgaaaagcccaccgatccagatgacccactggctgatcagaacattaaggac
cgttactatggcattaatgatcctgtggctgataaactcttgaagcgggcctccactatg
cccagactggacgtacctgaggacaagtccatcaccacactctatattgggggactggga
gaaaacgttacagattctgagctcaggaatcacttctaccagtttggggagattcgtacc
atcaccattgttcagaggcagcagtgtgctttcatccagttcgccacacggcaggccgca
gagacggctgcagagaagtcctttaataaactcatcattaatggacgccggctcaatgtt
aaatggggcaggtcacaggcggcgcgagggaaagagaaggatggcgtgacggagagtgga
atccgtctggaaccagtgccggggctccctggtgctctgcctccaccccctgtgtctgat
gaagatgcctccaccaattacttcaacctgcctccaaccagctcccctgctgtcatgaac
ctgggacttcctcctccacctggggttgccatgcccccaccacctgggtttggtcctcct
atgttccacaccatggatcccatggccccttcaatgcctccgccaatgggcatgcggcca
cctggacaggtccactacccatcccaggatcctcagcggatgggcgctcatgcaagtcgt
catggaggcccctag

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