Pimephales promelas (fathead minnow): 120494569
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Entry
120494569 CDS
T08155
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120494569 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120494569 (rbm22)
Spliceosome [BR:
pprm03041
]
Complex B
Other components
Prp19-related factors
120494569 (rbm22)
Complex C
120494569 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
RRM_YTH1
zf-CCCH_4
zf-CCCH_10
RRM_PARP14_3
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
120494569
NCBI-ProteinID:
XP_039549738
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQN
MEREIANSDGTRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDVPEDKSITTLYIGGLG
ENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKSFNKLIINGRRLNV
KWGRSQAARGKEKDGVTESGIRLEPVPGLPGALPPPPVSDEDASTNYFNLPPTSSPAVMN
LGLPPPPGVAMPPPPGFGPPMFHTMDPMAPSMPPPMGMRPPGQVHYPSQDPQRMGAHASR
HGGP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcgttaggctccaacacttacaacaggcaaaactgggaggattcggatttt
cccatcctctgtcaaacatgcttgggagaaaacccttatatccgcatgaccaaagagaaa
tttggcaaggagtgcaagatctgtgcgcgtcccttcacggtgttccgctggtgtcccgga
gtcaggatgcgctttaagaagacagaagtgtgtcagacctgcagtaaaatgaagaacgtc
tgtcagacctgcctcctggatctggaatatggcttgccgattcaggttcgtgacactggg
ctgtccgttaaagatgaagtaccgagatcggacgtgaataaggagtattacactcagaat
atggagagagagatcgctaactctgatggcacgagacctgtggggctgcttgggaaggcg
ccgagcagcagcgatatgctgctgaaactggctcgtaccacgccatattacaagaggaac
agacctcacatctgttccttttgggtgaaaggggagtgtaagagaggagaagagtgtccg
tacaggcacgaaaagcccaccgatccagatgacccactggctgatcagaacattaaggac
cgttactatggcattaatgatcctgtggctgataaactcttgaagcgggcctccactatg
cccagactggacgtacctgaggacaagtccatcaccacactctatattgggggactggga
gaaaacgttacagattctgagctcaggaatcacttctaccagtttggggagattcgtacc
atcaccattgttcagaggcagcagtgtgctttcatccagttcgccacacggcaggccgca
gagacggctgcagagaagtcctttaataaactcatcattaatggacgccggctcaatgtt
aaatggggcaggtcacaggcggcgcgagggaaagagaaggatggcgtgacggagagtgga
atccgtctggaaccagtgccggggctccctggtgctctgcctccaccccctgtgtctgat
gaagatgcctccaccaattacttcaacctgcctccaaccagctcccctgctgtcatgaac
ctgggacttcctcctccacctggggttgccatgcccccaccacctgggtttggtcctcct
atgttccacaccatggatcccatggccccttcaatgcctccgccaatgggcatgcggcca
cctggacaggtccactacccatcccaggatcctcagcggatgggcgctcatgcaagtcgt
catggaggcccctag
DBGET
integrated database retrieval system