Pimephales promelas (fathead minnow): 120494579
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Entry
120494579 CDS
T08155
Symbol
fbxo40.2
Name
(RefSeq) F-box only protein 40 isoform X1
KO
K10315
F-box protein 40
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120494579 (fbxo40.2)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120494579 (fbxo40.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
120494579
NCBI-ProteinID:
XP_039549751
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MSRFVVLVNCVLPQSHCRRSRPRLHRHCETCYSRRCKASIEVSVSCMVINCRLLCGASFH
LCKEEEHSLLCPNEKVPCINTHYGCPFTMHRSQLAKHLEVCPASVVCCSMEWNRWPVENP
DAPLCTNLLKELQEQESLDLSMALRDQKHLCARLKMRNYFPELMEEQEEETARTEESMCN
GIHVNGHGGSVLVNEPSTPCEKSLNEDVVLNGTIDKDKYNRFEKMFSMEMGACREAETLK
TEDKKGTNMPSKDPSFTKPQGASVEPEKEEADTSKTGFAPWQDGVLERLGQEVKPREFNM
YIVHHGRMLITFGQMDACTPRERDFVYGSLEPIPVQTLRSFKVPSSYKQKRFHQKECYSK
ALTEDKGVGTSDLDVSKNDGEEMDEMFATLLCSAEAEIRGHKISETVSVDGLYVDIATQT
YNFAKAPFKYNATLTEITEDRDLKLHVELETETVTLRHNKSTSAFTFLCGHFFRRDEFAS
HFKNVHSDIQSCLSGWFEQRCPLAYLGCTFSQRRLQPSTHRAKVSYNQDLSVFTLTPEIP
ASLMNHLQSGTLKARAKCEDLSSLPFEVLHHIAGYLDSFSLSQLALVSRLFRDICATLLQ
ERGMVAFKWRKRSYSHGGVRWKPTIVWEFSTLFSKVDNWCISNTPSMAEHLKHCPFYLAE
LKTEPFALAKFDNKREGRQSLVSLFMARK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttttgttgtgcttgtcaattgtgttttaccacagagccactgtaggagatct
cgtccaaggttgcacaggcattgtgagacctgttacagccgccgctgcaaagcctccata
gaggtctccgtgtcttgcatggtcatcaactgccgcttgctctgtggggcctccttccac
ttatgtaaagaggaggaacactctctgctgtgtcccaatgagaaggtaccatgcattaac
actcactatggttgccctttcaccatgcatcgctctcagctggccaaacaccttgaggtg
tgtcctgcaagcgtcgtctgttgctctatggagtggaaccgctggcctgtcgagaaccca
gatgcccccttgtgtacaaaccttcttaaagagctccaagagcaggaatcactggacctt
tccatggcgctgagagaccagaaacatctatgtgccaggttgaaaatgaggaactacttt
cctgagttgatggaggaacaagaagaggaaactgctcgaacggaagagtctatgtgtaat
gggattcatgtcaacggacatggaggttcagttttagtaaatgaaccatcaacaccttgt
gagaaatctctaaatgaagatgtggtcctaaatggtaccattgacaaggacaagtacaat
cggttcgaaaagatgtttagcatggaaatgggagcttgcagggaggcagaaacgttgaaa
acagaagataaaaaaggaacaaatatgccttcaaaagatccttcttttacaaagccacaa
ggagcttctgtagagcctgagaaagaggaagccgatacctccaaaactggatttgcacct
tggcaggatggcgtcctggagagactcgggcaggaggtgaaacccagagaattcaacatg
tatatagtgcatcacgggcgcatgctgatcaccttcggtcagatggatgcgtgcacaccc
agggagagagattttgtgtatggcagcctggagccaataccagtccaaactctacgttcc
ttcaaggttcccagtagttacaaacaaaaacgctttcaccaaaaagaatgctattcaaaa
gcattgactgaggacaaaggtgtcggcacgtctgaccttgacgtatctaaaaacgacggc
gaggagatggatgagatgtttgcgaccttactctgttctgcagaggctgagatacggggc
cacaaaattagcgaaactgtgtcagtagatggactttatgttgatattgcgacacagaca
tataattttgccaaagctcccttcaaatacaatgcaactctgactgaaattacagaagac
agagatttgaaacttcacgttgaacttgaaacagaaacagttaccctcagacacaacaaa
tccacctcggctttcacgttcctgtgtggccatttcttccggcgggatgagtttgcctca
cactttaagaacgtacattcggatatacaatcctgtctgagtggctggtttgagcagaga
tgccctctagcctaccttggttgcaccttcagtcagagaagattacagcccagcacacac
agggccaaagtctcttataaccaagacctcagtgttttcaccctcacacctgagattcct
gcctctcttatgaaccatttgcagagtggtacattaaaggcacgtgccaaatgtgaagat
ctcagtagccttccgtttgaggtgcttcaccacatcgctggttacctggatagtttcagc
ttgtcccagcttgccttggtctcacgattgttcagagatatatgtgccacgcttctgcag
gagagaggaatggtggcctttaagtggcgtaagaggtcatactctcatggaggtgtccgc
tggaaacctaccatagtctgggagttcagtactctttttagcaaagtggataactggtgt
atcagcaacactccgtcaatggctgagcacctgaaacactgtccattctacctagctgaa
ctgaaaactgagccctttgccctggccaagtttgacaacaaaagagaggggagacaaagt
ttggtttctttgtttatggcacgcaaatga
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