Pimephales promelas (fathead minnow): 120494626
Help
Entry
120494626 CDS
T08155
Symbol
gria1b
Name
(RefSeq) glutamate receptor 1b isoform X1
KO
K05197
glutamate receptor 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
pprm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120494626 (gria1b)
04082 Neuroactive ligand signaling
120494626 (gria1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120494626 (gria1b)
Ion channels [BR:
pprm04040
]
Ligand-gated channels
Glutamate (ionotropic)
120494626 (gria1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF4834
DUF2061
Motif
Other DBs
NCBI-GeneID:
120494626
NCBI-ProteinID:
XP_039549817
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MRQSFVFLLTGLLGLCSCSSFPSNINIGGLFPTDSHEYDVFRFALSQHNDVPKLVPQVDM
VDTGSSFAMTYAFCSQFSKGVYAIIGLYDRKTMNMLMSFCGSLHVCFVTPSFPIDTNNQF
VIQLRPELQDALIALVEHYKWTKFVYMYSSDSGLTVLQKILDTASEKTWQVTSINFDTLT
EAAFLKTIQDLENKKEYKIILDCELERLNSILNLIAAQKKNMKNYHYILANLGFLDLNLT
EFRKGGANVTGFQLMNYTNPTVSRTIQDWLEFDSKDLKSPKRRLKYTGALTYDGVTVMAT
AFQNLRKQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVQFEGLTGHVQFNDKGHRT
NFTVSVMEFGPNGPKKVGYWNQHEKYVNTATYSAVLNETFGLQNRTYVVTTILESPYVML
KKNHEQLVGNDKYEGYCVELAAEIAKHVGYSYRLELVGDGKYGARDAETLMWNGMVGELV
YGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMC
IVFAYIGVSVVLFLVSRFSPYEWHADDEEDGMEQQNQNQNQPSSPEANQSPNQHGQNQNQ
REEKQEKQPEHNNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSY
TANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDGGSTKEFFRRSKIAVFEKMWSYMKS
AEPSVFVKTTDDGVVRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVAT
PKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVF
YILIGGLGLAMLVALVEFCYKSRIESRRMKQIIDAAMLSSTLTRMGSGGENGRVMAHDFP
KAAQTLPCMGQAAAMGLSTTGM
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaaagcttcgtctttctcttaaccggtttgcttgggttgtgttcatgttcaagt
ttcccaagtaacatcaacataggaggtttgtttccaaccgactcccatgaatatgacgtg
ttccgtttcgcgctctctcaacacaatgatgttcctaaactggtaccacaagtggacatg
gtggacacggggagcagctttgccatgacatacgccttttgttcccagttctccaaagga
gtctacgccataatcggtctgtatgacaggaagactatgaacatgctcatgtcgttctgc
ggctctctgcacgtgtgcttcgtcacgcccagcttccccatcgataccaacaaccagttt
gtgatccagctgaggcctgagctccaggatgctctgatcgcccttgtcgagcactacaag
tggactaagttcgtctacatgtacagctcggactcaggtctgactgtgctgcagaagatt
ttggacactgcttctgagaagacctggcaggtgacatccataaactttgacaccctgaca
gaggcggcattcttgaaaaccatccaagatctggaaaataagaaggagtacaagatcatt
ctggactgtgagctggagagactcaattccattttaaacttgattgcagcgcaaaaaaag
aacatgaagaattatcactacattctagcaaacctgggatttctggatcttaatctcaca
gaattcaggaagggaggtgccaatgtaacaggcttccaactcatgaactacacaaatcct
actgtcagcaggacaatacaggactggctggagtttgacagtaaagacttgaaaagtccc
aaaaggaggctcaagtacactggagcactcacgtatgacggggtgactgtcatggccact
gctttccagaacctgagaaagcagcgcatcgatatatctcgccgagggaacgcaggagag
tgtctggctaaccctcctgcaccctggggccagggcatcgacattcagagagctttacag
caggtgcagtttgaaggacttacaggacatgttcagtttaatgacaaaggacatcggacc
aatttcactgtcagtgtgatggaatttggcccaaatggacccaagaaagtgggctactgg
aaccaacacgagaaatatgtgaacacagctacttacagcgcagtactcaatgagacgttc
ggactgcaaaaccggacctacgtagtcactaccatcctggaatccccatatgtgatgctg
aagaagaatcatgagcagctggtggggaatgacaaatatgagggttattgcgtggagttg
gctgcagagatcgccaagcacgtgggttattcctacaggcttgaactcgtgggggacgga
aagtatggagccagagatgccgagacattgatgtggaatggcatggttggagaattagtg
tatggcaaagcagacgtagctgtcgcccctcttaccatcactttggtcagagaggaggtc
atcgatttctccaagcccttcatgagcttaggtatatccatcatgatcaagaagcccacc
aagtccaagccaggcgtcttctccttcctggacccactagcgtatgagatctggatgtgt
attgtgtttgcctacattggcgtgagtgtggtgctattcttggtgagtcgattcagtcct
tatgagtggcacgcagatgacgaagaggatggaatggagcagcaaaaccagaaccagaac
caaccatcatcaccagaggccaaccagtcaccaaatcagcacggccaaaatcagaatcag
cgagaggagaagcaggagaagcaacctgaacacaacaatgagtttgggatcttcaacagc
ctgtggttttccctgggagcctttatgcagcaaggatgtgatatctctccaaggtctctc
tctggtcggatagttggaggtgtatggtggttcttcactctgattatcatctcctcgtac
acagccaacttggctgccttcctcactgtggaaaggatggtgtcacccattgagagtgcc
gaggatctagctaagcaaacagagattgcttatggaactctggatggaggatccaccaaa
gagttcttcaggagatcaaagatcgcagtatttgagaagatgtggtcctacatgaagtct
gcagagccttctgtatttgtgaagacgacagatgatggtgtcgtgcgggtgaggaagtcc
aaagggaagtatgcttatttgctggaatccactatgaatgaatacattgaacagcgcaaa
ccatgtgacaccatgaaggtgggaggaaacctggactcaaagggctatggagtagccaca
cccaaaggatccgccctgagaaacccagtaaacctggcagtgttaaaactgaacgagcag
ggcctgttggacaaattgaaaaacaaatggtggtacgacaagggagagtgtggcagcgga
ggaggtgattccaaggataagaccagcgctctgagcctcagtaatgtggctggagttttc
tacattctgattggcgggcttgggcttgccatgctggtggcccttgttgagttctgttac
aaatccagaatcgagtctcgaaggatgaagcaaatcattgacgcagccatgctcagctcc
accctgaccaggatgggcagcggaggtgagaacggacgtgtgatggcccatgacttcccc
aaagcggcacagactctgccatgcatgggccaggcggccgccatgggcctcagcaccact
gggatgtaa
DBGET
integrated database retrieval system