Pimephales promelas (fathead minnow): 120494628
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Entry
120494628 CDS
T08155
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04068
FoxO signaling pathway
pprm04110
Cell cycle
pprm04120
Ubiquitin mediated proteolysis
pprm04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120494628 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
120494628 (skp2)
04150 mTOR signaling pathway
120494628 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120494628 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120494628 (skp2)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
120494628 (skp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_4
LRR_8
WC-rich
DUF3708
Motif
Other DBs
NCBI-GeneID:
120494628
NCBI-ProteinID:
XP_039549823
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MSNERPLQELSENLEGSLCRPLRTKGKKRSACSVGLDTENTPNELIQQWSPPHKKPLSSA
KGKENEENVFFLARRPRKRRDSSAGLCWDSLPDELLLGILSRLSLQDLLRTSRVCKRWHR
LAFDESLWHGVDLVGKAQLDAELGQVLSAGALRLRCPHTCIGQPTFKSAEKLRIQHLDLS
NCTVETSVLEDILFRCRHLQNLSLEGLVLSDSIIHSLAQNTEIVRLNLCGCSGFSPESLA
EMLKSCTRIEEMNVSWCDFNNLHVQAIANNIPSSITQLNISGYRQNLIMEDVKAIVKRCP
NLTTLDLSDSVLVTTDSFQVLQQLSSLKHLGLSRCYQIHPASLIDFEKFPNLQTLEVFGL
IQDSYLPILCKGLPHIQINTQPFSTVARPTSSSRKDRTLWGMHCRLVYKH
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgaaaggccgcttcaagaattgagtgagaatttggagggatccttgtgcagg
cctctgaggactaaagggaaaaagcggtccgcctgtagcgtgggtctggacacagaaaac
acaccaaacgagctcattcagcagtggtcacctccacacaaaaagcccctgagttctgca
aaagggaaggaaaatgaggaaaacgtattttttcttgccagacgccccagaaaaagaaga
gattcctcagcaggcttgtgctgggacagtctacccgatgagctgttgctgggaatcctg
tctcgtctctcactgcaagatctcctcaggacgtcacgggtctgcaagcgctggcatcgt
ttagcgtttgatgagtctctgtggcacggggtggacctggtgggaaaagctcagttagat
gcggagcttgggcaggtgctctcagctggggcattgaggctgcgctgtccgcacacctgc
atcggtcaacccacttttaaaagtgcagagaaacttcgcatccaacatttggatttatca
aattgcacagtggagacgtctgttctagaagacatcctgtttcgctgcagacatctgcag
aatctcagtctcgaaggattggtgctctccgatagtattatccattctcttgctcaaaat
actgagattgtccgactgaatttgtgtggctgttctggcttctctcctgaatctctggct
gagatgctgaaatcttgcactcgaattgaagaaatgaacgtgtcgtggtgtgacttcaac
aatcttcatgttcaagccattgctaacaatattccctccagcatcactcaactgaacatc
agtggttacagacaaaacctcatcatggaagatgtcaaagctatagtaaaaagatgtccg
aacctcacaaccctagatttgagtgatagcgtgcttgtgacgacagacagtttccaagtc
ttgcagcagctttcctccctgaaacatctgggactgagtcgttgttatcagatccaccca
gcttctctcattgactttgaaaagtttccaaatttgcagaccctggaggtctttgggctc
atacaggacagctacctgcccattctttgtaaaggtctaccgcacatacagatcaacaca
cagcctttctccactgtggcacgtcccacctcgtcatcaagaaaagatcgcacactttgg
ggaatgcactgccgactcgtctacaaacattaa
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