Pimephales promelas (fathead minnow): 120494651
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Entry
120494651 CDS
T08155
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120494651 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120494651 (nfrkb)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
120494651 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
120494651
NCBI-ProteinID:
XP_039549863
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MDALDHMLTDPLESGMDQDGRVMEECMLGNCRVRVPEDLLEDPEIFFSVMSESTWTDVLS
DAQRTHLRQLLPQFSENNNSEQNSIISDLFNDQNFFFGNPLHIAQKLFRDGYFNPEVVKY
RQLCAKPQKKRHIYSLQQYYHKLLKQILVSRKDLLDLAVRSGPELAVKRRYPVPSHKEML
EQRVRRRVAHILKDVKTECGDSNVSSDEDDTASWLPVPPSPSSPTATVSLRVLPSLSTQD
MKTRDKPELGEKELRTLLQRHREKRKRQPDHPDLMISELHLGDIMSRVNIGRKGSVTTVF
DLALPKKKIKEERKKKKMRPIKMESEEVCDVPMSAASMNSGLNDTPTVPTQSVKEEPIDE
SQASPDRVEEIAMSFFHLLEDILRLESLATSSALEEKVQQWQSSPASALNPWFSMAPCWS
ELVVPALQFLTGESKAGVMVLPTGFIPFVEFKELSQQWKWICPSQDGDKDLSALCQLWLE
SKDHVIVKLEGEESAELTPPTPRVWTDYVVRPSTGEERHVFQEQEQQRYDQPHKAFTYRM
HGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEI
CELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSQEEFE
RIHQAQAAAAKAKKALQQKPKPAPKPKAGGKEPGSKNGAAEAGQSSGSEGVAISSTSLSQ
TPSTPTQSTPGTPKSPLHPTAATLTKVCAPEPVKTNPSVLLVSPPSMSQLGTLLSSSQPG
PQVSQQASAQPATRVVAHSAATGSLPQVRVVTTQPGLPTSSASQAATLVHQSPHHIRVPV
TVAHGKNITQAVVTLPLRNQSAGSPIQVQASRGQASLTVSGLASGVTVTKPQTSSPSSPA
HKPTSTAVLQGVTSQNIIKQVAITGQLGVKTQSGAGIPLTATNLRIQGKDVLRLPPSSIT
TDAKGQTVLRITPDMMATLTKSPMATVKLTPEMLSSATSSGSKSISATLHVSPSQPSPPT
SITTASTTTENLSAKVPTTGTATLVKVHPELKAACDTAIRLMPALAVTMTDPKARTFSTV
TSSDSKAATTIRIVPNLGVIPQKHGQTVSISTTTTSTKPVTVSSGATTVAIATSGVGGAK
SVTLGPATTGSTLSLGTAAATVRQVPVSATVVATQAGKLPTRITVPLSVLSQPLKNKSVV
TTPILKGNISTNISNLGRNIILTTMPAGTKLIAGNKPVSFVTAQQLQQLQQQGQATQVRI
QTVPAQQLQRTAASSPKSTVSTVVVSTAPSPKTNPDPQ
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggatgcattggatcacatgttaacagacccactggagtctggaatggaccaggatggt
cgtgtgatggaagagtgcatgttgggaaactgtagagttcgggttcctgaagatttgctg
gaggatccagagattttcttttcagtgatgagtgagagcacatggacagatgttctctca
gatgctcaacggacacatcttcgtcaactcctgcctcagttctccgagaataacaactcc
gaacagaacagcatcatcagcgatcttttcaacgaccagaatttcttcttcggaaacccc
ttacacattgcccagaagctttttagagatggttactttaacccagaggttgtcaagtac
agacaactttgtgccaaaccacagaaaaaaaggcacatctactctcttcaacagtactac
cacaaattactcaagcagatcctggtctccagaaaggatttgctggatttggctgtccgt
agtggacccgagcttgcggtaaaacggcggtaccctgtcccttctcataaggagatgctg
gagcagagggtgagacgtcgagtggctcacatactgaaggatgtgaaaacagagtgtggg
gacagtaatgtgtcatctgatgaagatgatacagcctcttggttgcctgttcctccgtcg
ccctcctccccaactgcaaccgtctctctcagggtcctacccagcctttctactcaggac
atgaaaaccagagacaagcctgagctgggtgagaaggaactaagaaccttgttacagaga
cacagagaaaaaagaaaacgtcagccagatcaccctgaccttatgatctccgagctccat
cttggtgatatcatgtcacgagtaaacatcggcaggaaaggatccgttacaaccgtcttt
gacctggccctacctaagaagaagataaaggaggagaggaagaagaaaaagatgcgccct
attaaaatggaatcggaggaggtctgtgatgttccgatgtcggcagcttccatgaactcc
ggccttaatgataccccgacagttccaacacaatccgttaaagaagagcccatagacgag
tcccaggcaagccctgacagagtggaagagatagcaatgagcttttttcatttgcttgaa
gacatcctcagactggaaagtctagcaacatcctctgcgttggaggagaaagtccaacag
tggcagtcatctccagccagcgcactcaacccctggttctccatggccccctgctggtca
gagttggttgtacctgctctacagtttctcactggagagagcaaagctggtgtgatggtt
ctgcctactggtttcataccttttgtggaattcaaggaactctcccagcaatggaaatgg
atatgtccgagtcaggatggagacaaagatctgagtgccctgtgccagttgtggctggaa
tcaaaggatcatgttattgtcaagctggagggtgaggaaagcgcagaactcactcctcca
acacccagagtgtggactgactatgtggtgagacctagtacaggagaggaaaggcatgtt
tttcaagagcaggagcagcaacgttatgatcagccacataaagcctttacttaccgaatg
catggctttgaatctgtggtgggaccagtcaagggagtttttgacaaggagacctcgctc
aataaagcgcgagagcattctttgctgcgctccgaccgaccggcctatgtcaccatacta
tctcttgtgagagatgctgctgccaggcttcctaacggagaaggtaccagagctgagatt
tgtgagttactgaaggactcccagttcctagccccagatgtcaccagtgcacaggtgaac
actgtggtgagtggtgccctcgaccgcctgcactatgagaaagacccttgtgtgaaatac
gacatcggccgcaagctgtggatctacctccacagggaccggagccaggaggagtttgag
cgaatacaccaggcccaggccgcagctgctaaagccaagaaagccctgcagcagaaaccc
aaaccagcaccaaaacctaaggcaggtggtaaggagccaggcagtaagaatggtgctgca
gaggctggccagagctcaggcagtgaaggagtagccatttcatccaccagcttgtctcaa
actccttccacccccacacagagcacccctggaacccctaaatcgcccctccatcccaca
gcagctactctaaccaaagtatgcgccccagaacccgtcaaaaccaatcccagtgtcctg
ttggtgtctcctccctccatgtctcagttaggaacgttgctgtcttcgagtcagccaggt
ccacaggtttcccagcaggcctctgcacagcccgcgactcgggtagtggcacactcggct
gccactggctctctgcctcaggtgcgagtggtcactacacagcccggtcttccgacgtcc
tctgccagccaggcggccacattagtgcaccagagccctcaccacatcagagtgccggtc
actgtggcgcatggaaagaacatcacgcaggcagtggtgactctaccactaagaaaccag
tctgcaggaagtcccattcaggtgcaggcttcacggggtcaggccagtcttactgtttca
ggtcttgcatctggtgtcacagtaaccaaacctcagacgagctccccctccagcccagct
cacaaaccaacctcgactgctgtattgcagggtgtcaccagccagaatatcatcaaacag
gttgcgatcactggtcagttaggtgtaaagacccagagtggggccgggatccctctcacc
gccactaacctacgcattcaggggaaggatgtgctccgtttgcccccctcctcaattaca
actgacgccaaaggtcagacagtacttcgcatcactccagacatgatggcaacccttact
aaatctccaatggccacggtcaaactcaccccagaaatgctgagcagtgccacaagctca
ggcagcaagagcatctctgccacgctacatgtgtctccatcccagccttcaccccctacc
tcgatcaccactgcgtccacaacaactgagaacctgtctgccaaagtgcctaccacaggc
accgctaccctagttaaagttcaccctgagctgaaggccgcctgtgacacggccatccgc
ctcatgccggccctggccgtcactatgactgaccccaaggcccgtacattctcaaccgtc
acctcttcggactctaaagcagcaaccactattcgaatagtgccaaaccttggtgtgatt
cctcagaagcacggtcagactgtctcaattagcacaaccaccacaagtacaaagcctgtc
acggtatcatcgggggcaacaactgttgccatagccaccagtggagtgggaggggccaaa
agcgtgacactgggccctgcaaccacaggctctacgctttctttgggcactgctgcggcc
acagtcagacaggtgccagtgagtgctaccgtagtagccacacaagctgggaagcttccc
acgaggatcacggtccctctatctgtcctcagccaacctttgaaaaataagagtgtggtc
actacccccatacttaaagggaacataagcaccaatatcagcaatctggggaggaacatt
atcttgactaccatgccggcaggcaccaagttgattgccgggaacaagccagtcagtttt
gtgactgctcaacaactgcaacagctacagcagcagggacaggccacacaggttcgaatc
cagaccgtaccggctcagcagctacagcgcacagccgccagctctccgaaatccacagtg
tcaacagtggtggtctctactgcaccgtcgccaaaaacaaacccagaccctcaatga
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