Pimephales promelas (fathead minnow): 120494672
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Entry
120494672 CDS
T08155
Symbol
bbs1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein isoform X1
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120494672 (bbs1)
Cilium and associated proteins [BR:
pprm03037
]
Primary cilia and associated proteins
BBSome
120494672 (bbs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
BBS2_Mid
PHTB1_N
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
120494672
NCBI-ProteinID:
XP_039549900
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MSSVSQELKDTSVASSKWLDAHYDPVANLYTFSSCIALSDLHGDGENKLVVGDLGTGVCH
MKLKVYRGTGLLSESTLLDLPTGLVSFLMDLHEPRTPAIAVASGPFIYVYKNLRPYFKFT
LPSLEVNALEQDVWSQAREDMIDPMTLKEMLEGLRDKAEIPLSVRSLRFLMLEPQEMESF
VHLYKEQPIRRQTVITCIGTMKKNMADEDAVSCLVIGTENGDVYILDPEAFTILYKISLP
STATLMDVTGQFDVEFRITVACRNGNIYILRRDSPKPKYCIELSSHPVGLVRMGKNVVVG
CTDETLHGYTQKGKKLWTAYLPAPVTTMALMDLPTRGFQAVLVGLANCEVHMYRDKNLIS
TIKTPDVVTSICFGRYGREDGTLIMTTKGGGLIVKILKRTAVFDDRDSAPGPPIAQSIRL
NVPKKTKLYVDQTLRERENAVAMHRAFQMDLSRLRLAAARAYVKALESSLAPMSASLTEP
LKMNAVVQGLGPSFKLTLNIQNTAASRPVMNLAISFLYDESLYSMRTAFFKIPLLVPGLN
YPIDTFVECLSDKGISDIIKVFVLREGKSAPLLTAHINMPVSEGLALN
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgtttcccaggagctgaaggacacttcagtggccagctccaaatggcttgat
gcccactatgacccagtcgccaatctatacaccttttcctcttgcattgctctttcagat
ttgcatggagatggtgagaataagctggtggtgggtgatcttggcacgggagtgtgtcac
atgaagctaaaggtgtaccgtggcactggcctgttgagtgagagcaccctgctggacttg
cccactggactggtctccttcctcatggacctgcatgagccacggacaccggccatcgct
gtggcctctggtcccttcatatacgtctacaagaacctgaggccctacttcaagttcacg
ctgcctagtctggaggtgaacgctctggagcaggacgtctggagtcaggccagggaggac
atgattgatccaatgacccttaaagagatgttagaaggattgagggacaaagctgaaatt
ccactctctgtcagatcgctacggttcctcatgcttgagccacaggaaatggagagtttt
gttcatctttacaaagaacagcctatacgtagacagacggtcattacctgtatagggacg
atgaagaagaacatggcagatgaggatgcggttagctgcctagtgattggcacagagaac
ggtgatgtttacatattagatccagaagcctttaccattctctataagatatcactgcct
agtacagccaccctaatggacgtgacgggtcagtttgatgtggaattccgtatcactgtg
gcctgtcgcaacggcaatatctacatattacgcagggattccccaaagcccaagtactgc
attgagctgtcttctcacccagtaggactggtgaggatgggaaagaatgtagttgtagga
tgtaccgatgagacgctgcatggttacactcaaaaggggaaaaagctgtggacagcttat
ttgccagcccctgttaccaccatggcactgatggacctccccacacgaggattccaggct
gttctggtgggtctggccaactgtgaagtacacatgtacagagacaaaaatctgatcagc
accatcaaaacaccagacgtagtgacaagcatttgtttcgggcgctatggacgggaggat
ggcactctgataatgaccaccaaaggaggaggtttgatcgtgaagatcctcaagaggacg
gctgtgtttgatgacagagactcggcccctggacccccaatagcccagagcatccgcctg
aacgtgcccaagaagaccaagctctatgtggaccagactttgagagagcgtgaaaatgca
gttgccatgcaccgagcttttcagatggatctaagcaggctgcgtctagctgctgctcgt
gcttatgtcaaagccctggagtccagtctcgcgcccatgtctgcgagcctgaccgagcct
ctcaagatgaacgcagtggttcaagggctgggcccatccttcaagctcactctgaacatc
cagaacactgcagcgtctcgtccggtcatgaacctggccatcagttttctgtatgatgaa
agtttgtacagcatgaggacagccttcttcaagattcccttgctggttccaggcctgaat
taccccattgacacttttgtggagtgcttgagtgacaaaggcatctctgacatcatcaaa
gtgtttgtgctgagagaaggaaagagtgctcctctcctcaccgcccacatcaacatgcct
gtgagtgaaggacttgcactgaactga
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