Pimephales promelas (fathead minnow): 120494739
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Entry
120494739 CDS
T08155
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120494739 (supt6h)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120494739 (supt6h)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
120494739 (supt6h)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
120494739 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
HHH_3
HHH_9
S1_RRP5
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
120494739
NCBI-ProteinID:
XP_039549995
LinkDB
All DBs
Position
Unknown
AA seq
1719 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQRFMEDDEEEEEEENTEDQDEHGNLRGLIDDDLE
EEDVAEVASEKEDSDSGEEVRHRRRKRSYDDYLDDDDLDLIEENLGVKVKRRKKKYSRVK
TMDDEGEDDEKDQIADEIFTGDGDGDGEVEEGEAVDTLHPRDDEEEEDDEESDIDDFIVD
DDGQPITKKKGKKFSGYTDAALQEAQEIFGGDFDFAEFDTEAYDHAEEEEEDQDDESWDR
PKKQTKRRVGRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRAIPVKPAEDDELE
EEAEWIYRNAFSTPTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQHFEVPF
IAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQRMQSYQFEQISADPDKP
LADSTRPLDTADMERLKDVQSLDELGDVYNHFLLYYGRDIPKMQNATKVNKKKLKKIKEV
SEEDGEEAEVEDEEEEEEQKGPDLKQASRRDMYSICQSAGLDGLAKKFGLTPEQFGENLR
DSYQRHETEQFPAEPLELAKDYVCSQFNTPEAVLEGARYMVAMQIAREPLVRHVLRQTFQ
ERAKINIKPTKKGKKDVDEAHYAYSFKYLKNKPVKELSGDQFLKMCLAEEEGLLAIDICI
DLVGVKGYGDQTYFDEIKQFYYRDEFSHQVQEWNKQRTLAIERSLQQFLYPQMAKELKNK
LIAEAKDNIVKSCCKKLYNCLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAFASGRDT
PVFCSLINGEGEVVDFLRLPYFLKRRNAWREDEREKKLQDIENLKKFLLSKKPHVVAVAG
ENRDAHMVLEDIKRTISELEQDSSLPAVGVELVDNELAVLYMNSKKSEADFRDYPPLLRQ
AVSVARKIQDPLVEFAQVCSTDEDILCLKLHPLQEHVVKEELLGALYCEFINRVNEVGVD
VNRAIAHPYTQSLVQYICGLGSRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCA
GFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEI
LENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAPYRPPNTEEVYNM
LTKETPETFYIGKLITCVVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEV
WNHFDSGSCPGQAIGVRTRLDNAVMGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKIDI
EKFNVDLTCRTSDLSDKNNEWKLPKDTYYDFDAETDDVKQEEELKKKQQRTTYIKRVIAH
PSFHNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAF
SLGHTLWINNEEFEDLDEITARYVQPMAAFARDLLGHKYFHDCNGGDRKKMEELLIRSKK
EKPTFIPYYVSACRDLPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQVFSTVNGLFRWFK
DHYQDPVPGVTPTSSRTRTPASVNATPANINIADLTRAVNALPRNMTSQMFNAIAAVTGQ
GQNPNTTPAQWASSQYGYSGGSSAGGGGSSSAYVFATPQQPMATPLMTPSYSYTTPGQQQ
AMTTPQYPSSTPQSSHHQHSSSTPSSSSSRVRTPQPKTSSHTAVDWGKMAEQWLQEKEAE
RRKQKTPRMTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcatcgagagcgaggctgaggagtcggaggaggagttcgaagagaaagac
ctgaagcccaagaagacacagagatttatggaagatgatgaagaggaagaggaagaagag
aatactgaagatcaggatgagcatggaaacctgagaggactcatcgatgatgatttggaa
gaggaagatgtggcagaagtggcgagtgagaaagaggacagtgactctggtgaagaggtc
cgtcatcgccgcaggaaacgaagttatgatgactatctggatgatgatgatctggacctc
attgaggagaatttaggagtgaaagtaaagaggaggaaaaagaagtactctcgtgtaaaa
accatggatgatgagggggaagatgatgagaaagaccagatcgctgatgagatcttcact
ggggatggagacggagatggagaggtggaggaaggagaggctgtggacacacttcaccca
agagatgatgaagaggaggaagatgatgaggaatctgacattgatgatttcattgtggat
gatgatggacagcccatcactaaaaagaagggaaagaaattctctggctatactgatgct
gctttgcaagaagctcaagagattttcgggggtgattttgactttgctgagttcgacact
gaggcgtatgatcatgcggaagaggaagaggaggatcaggatgatgagtcatgggatcga
ccgaagaagcagaccaagagaagagttggccgtcgtagcatctttgagatctatgagccc
agtgagctggagagcagccacatgaccgatcaggacaatgagatccgctctacagacatg
ccagaaagattccagttgagggccatccctgtaaagcctgctgaggatgatgagctggag
gaagaagctgaatggatttacaggaatgccttctctacaccaaccatctccatgcaggag
agcacagactacctggatcgtggaacaaccaccaatttcagcagaaagggccccagtact
attgctaaaatcaaagaagccctgaactttatgaggaatcaacactttgaggttcccttc
attgcattctacaggaaggagtatgtggagccagagctgaacattaatgatctgtggaag
gtgtggcagtgggatgagaagtggacccagctgaagaccagaaagcagaacctgacacgt
cttttccagcgaatgcagtcttatcaatttgagcagatctcagctgaccctgacaagcca
ctggctgactcgactcgtcccctagacactgctgatatggagagacttaaagatgtccag
tctcttgatgagctgggagacgtctacaaccactttctgctctactatggccgagacatt
cctaagatgcagaatgcaaccaaggtcaacaaaaagaaactgaagaagatcaaggaagtg
tcagaggaagatggggaagaagcagaggtggaagatgaagaggaagaagaggagcagaaa
gggccagatctgaaacaagcgtcccgtagagatatgtacagcatctgccagagcgcaggc
cttgatggtcttgccaagaagtttggtctgaccccagagcagtttggagaaaatttgcga
gacagttatcagaggcacgaaactgagcagttccctgcagagcctttagaactggccaag
gactatgtgtgcagtcaatttaacaccccggaggctgttctggaaggcgctcgctacatg
gtggccatgcagattgcccgtgaaccactggtcaggcacgtgctcagacagaccttccag
gagagggccaagattaacatcaagccaacgaagaagggaaagaaggatgtggatgaggcg
cactatgcttattcattcaagtacctgaagaacaagcctgtgaaagagctcagtggagat
cagttcttgaagatgtgcctggctgaggaggaaggcctgctcgccatagacatctgcatt
gaccttgtgggagtcaaaggttatggagatcagacatactttgatgagattaagcagttc
tactacagggatgagttcagtcaccaggtgcaggaatggaacaagcagagaacacttgcc
attgaacgttcccttcagcagttcctgtatccacagatggccaaggaactgaaaaataag
ctaattgctgaagccaaggacaatattgttaagtcttgctgcaagaagctgtataactgc
ctgaaggtggctccttatcggcctgatcagcaggtagaggaggatgatgaccttatggat
gagtcacaaggaaagggtatccgtgtactcggggtggcctttgcttctggcagagacacg
ccagtgttctgctccctcatcaatggtgaaggagaggttgtggacttcctcaggctacct
tatttccttaagaggagaaatgcatggagagaggatgaaagagagaaaaagcttcaagac
attgaaaacctcaagaaattcctgcttagtaagaagccacatgttgttgcagttgctggg
gagaatcgtgatgctcatatggtgttggaggacatcaagcgcaccatcagtgagctggag
caggactcctctctgccggcggtgggagtggagctggtcgacaacgagctggctgtgctt
tatatgaacagcaagaagtctgaggcggacttcagagactacccacctctgcttcgacag
gctgtgtctgtggctcgcaagattcaggaccccctagtggagtttgcccaagtctgcagc
actgatgaggacatcctgtgtttgaaactgcatcccctacaggagcatgttgtgaaagag
gagcttctgggcgctctctactgtgagtttataaaccgggtgaacgaggttggtgtggat
gtgaatcgtgccattgctcacccttacacccagagcctagtccagtacatctgtggcctt
ggatctaggaaaggctcacacctgctcaagattcttaaacagaacaacactaggttagag
aaccgtacccagttggtcaccatgtgccatatgggacccaaagtctttataaactgtgct
ggctttatcaagatcgacactgcctctcttggtgacagcactgactcctacattgaagtt
ctggacggttcccgagtgcaccctgaaacgtatgagtgggcgcgtaaaatggcagtggat
gctctagagtacgacgagtcggcagaagatgccaacccagccggagcgctagaggagatc
cttgagaacccagagagactgaaagacctggatctggatgcctttgctgaggagctggag
agacagggttatggaaataagggaattacgctgtatgacatccgagcggagctcagttgt
agatataaagatttgagagccccttacagacctcccaacactgaagaggtctataacatg
cttaccaaggagacgcctgagaccttctatattggtaaactcatcacctgtgtggtgact
ggcatcgctcacagaaggccacagggtgagagttacgaccaggccattcgtaatgatgag
acgggactctggcagtgtcctttttgccagcaagacaactttcctgagctcagtgaggtg
tggaatcactttgacagcggctcctgtcctggtcaagccattggagtgagaaccaggtta
gataacgctgtcatgggctttatcccaaccaagtttcttagtgacaaggtggtcaaacac
cctgaggagagggtcaaggttggcatgaccgtgcactgccgcatcatgaagattgacatt
gagaagttcaatgtagacctcacttgtagaacatctgatctgagcgacaagaacaatgaa
tggaagctccccaaagacacctactatgactttgatgctgagacagatgatgtcaagcag
gaagaagagcttaagaagaaacagcagagaaccacttacattaagcgtgtgatcgctcac
ccgtccttccacaacatcaacttcaaacaagcggagaagatgatggaatccatggaccag
ggtgacgtagttattcgacccagcagtaaaggggagaaccacctgacggtcacgtggaag
gtggctgatgggatctatcagcatgtggatgtacgtgaggagggcaaagagaatgccttc
agccttggacatactctttggatcaacaatgaggaatttgaggatctggatgaaataaca
gccagatatgtccagcccatggctgcatttgcacgagatctgctcggccacaagtacttc
catgactgcaatggaggtgataggaagaaaatggaggagcttctcataaggtccaagaaa
gagaagccgacattcatcccctactacgtttcagcttgtagagacctaccgggcaaattt
ctcctgggttaccagcctagagggaagccgaggatagaatatgtaaccatcactccagat
ggctttaggtatcggtctcaggtattctctacggtcaatggtctcttccggtggttcaag
gaccactaccaggatcctgtgccaggtgtcacaccaaccagcagcagaacgcgaacacca
gcatcagtgaacgccacacctgccaatattaacattgcggacttaactcgagccgtcaac
gctcttccacgaaacatgacatcccagatgttcaacgccatagcggcggttacagggcag
ggccagaatcccaacacaacgccggcccagtgggcctccagtcagtatggttacagcggc
ggcagcagtgcaggaggaggtggcagcagcagcgcttatgtatttgcaacgccccagcag
ccaatggccacacccttgatgacgcccagctactcttacaccacacctggccaacagcag
gccatgaccacgccccagtatcccagcagtacaccacagtcctcacaccatcagcattcg
tcctccacgccatcgtcctcgtcatcgagagtgcggacgccacagcccaagacaagttcc
cacactgccgttgattggggtaagatggctgaacagtggctgcaggagaaagaagccgag
cggcgaaagcaaaagacgccccgcatgacaccccgaccttcgcccagtcccatgatcgaa
agcacgcccatgtccatcgccggagacgccactcccctcttggacgagatggaccgatag
DBGET
integrated database retrieval system
