Pimephales promelas (fathead minnow): 120494747
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Entry
120494747 CDS
T08155
Symbol
trpc2b
Name
(RefSeq) transient receptor potential cation channel subfamily C member 2b
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120494747 (trpc2b)
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120494747 (trpc2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
DUF6779
RNase_H2-Ydr279
Motif
Other DBs
NCBI-GeneID:
120494747
NCBI-ProteinID:
XP_039550007
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MENLTPEQWREIVNKKFRFPPELLGAIRERNINLVSSLLKTGDGIIRQLDDSEDRLWREA
LNLSIRLGNEDTMDTLLQGIKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDLEKGNKMDV
RSFAMAIFDHSIDDSQFAPGVTPLTLACQKDLYEIVTMLNQKGHEIPWPHKISCACLDCG
NGRQYDLLKFSLSRINTYRGIASRAYLSITAEDAMLSAFRLSRDLRKLSKKEPEFKPEYL
SLEQVCQEFAVELLGMCRNQSEVTTILNSCGNQGEDSEDELDQQTFEEGIPNLARLRLAV
NYNQKQFVAHPICQQVLSSIWCGNLSGWRGSRTAWKLLVSFGIFLTMPLLCLIYWIAPKS
KMGKIIKIPVIKFLLHSASYMWFLITLLGESIAMEVYRDSFASRQHTILHSSFHMVWVVG
FFWFECKEVWIEGLKSYFLDWWNCLDVMVLSMYLASFALRVVIMLKVHFLCQLPDNQDEC
VYFNNTLRDEWHQEDPQFIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMM
RFMFILVIIGTAFLCGINNVYVPFLMSPNLGRLNETFSFLFWTMFGMADQTYVDMPEFVL
AEFVGRILYGIYTLIIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLT
MPVPFNIIPSPKAAFYLLRGIFKRICCCCFNCNSTPDYPPITSMDDKGSGENRVSYRQQV
IRALVQRYIESARREFEEAKRKDVGNRITELSKVISQLHSEMKQIHTNISEYSDNDKPDP
SGVSSFLGKYIIGAKNNFKDFDNERRSAPRHEVAHHEEPAQTVKEKHEEGSPTTNIEADG
TSNEVQSSEGDIGEGGNETGIDDAIEISMKEEGAEKSTSETVIDIESHSDIESEASGKRE
DETMTENTKDNIEELNTDEATGGSDLNEAETEENNGTTEDINEDVVEVVSEESTSQGIKF
DLSQTSLVCLLAKRIEEKLARKTPLVTNFTFSGKQASSPTGSDGSQDTGFGSQVFESSTS
SP
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagaacaatggcgcgagattgtgaacaagaagttccgcttccct
ccagagctcctcggcgccatccgagagaggaacataaacttggtgtcttcgctgctgaag
acgggtgacggcatcatccgtcagctggacgactccgaggacaggctatggagagaagcg
ctgaacttgtccatccgacttggcaatgaggacaccatggacacccttctccaagggatc
aagtttgatttccggcagattcacgaagctcttctggtggccgtggacaccaaccaacct
cgtgtggtcaagcgcctcctggaccggctggatctagagaagggaaacaagatggatgtg
cgctctttcgctatggcaatttttgaccactccattgacgattcccagtttgcccctggg
gtgacaccattgactctggcctgtcagaaggatctgtatgaaattgtaacaatgctgaat
cagaaaggtcacgaaattccttggcctcataaaatctcatgcgcatgtctggattgcggg
aatggacggcaatacgatttgctcaagttctcgttgtcccgtatcaacacctaccgaggt
attgccagccgtgcttacctgtccatcaccgcagaagatgccatgctcagtgcctttcga
ctcagccgggatctccgcaagctgtctaagaaggaacctgagtttaagcctgagtatctt
agcctcgagcaggtgtgccaggaatttgccgtcgagctgcttggaatgtgccggaaccaa
agcgaggtcaccaccatcctgaacagctgtgggaatcagggcgaggacagcgaggacgag
ctggaccagcagacctttgaggagggcattccaaaccttgctcgcttgaggcttgccgtc
aactacaatcaaaaacaatttgtagcccaccccatctgccagcaggtgctctcctccatc
tggtgtgggaacctttcaggttggaggggcagcagaacggcatggaagcttctggtgtct
ttcggtatcttcctgaccatgcctctcctttgcctaatctactggatagcaccaaagtca
aagatggggaagataataaagatcccagtgattaaattcctcctccattcggcttcatat
atgtggttcctgatcacgcttctgggggaatccattgccatggaggtgtatcgggacagc
tttgcctctcgtcagcacaccatcctgcacagctctttccacatggtctgggtggttggt
tttttctggttcgagtgtaaggaggtttggatcgagggcttgaagtcttacttcctggac
tggtggaactgtctggacgtgatggttcttagcatgtacctggcttcattcgccctgaga
gtagtcatcatgctcaaggtccacttcctctgccagttacccgacaaccaggatgagtgt
gtctacttcaacaacactctgcgcgatgagtggcatcaggaggatccccagttcatcgct
gaggtgctgtttgcagtgaccagcatgctgagtttcactcgcttggcctacatcctgcca
gcacacgagtctctaggtaccctgcagatctccattggaaagatgattgacgacatgatg
agatttatgttcattttggtgatcattggaaccgccttcctgtgtggcatcaacaatgtc
tatgtcccatttctgatgtcccctaatcttggaagattaaatgaaaccttcagcttcctc
ttctggacaatgtttggtatggccgaccagacctatgtggacatgcccgagtttgttttg
gctgagtttgtgggcagaatcctttatggcatctacaccctgatcatcgtcattgtactt
ctaaacatgctgattgccatgatcaccaactcttttcagaaaattgaggatgatgctgat
gtagagtggaaatttgcccgttcaaagctctacctgagttacttcagagaaggcctgact
atgcctgtccccttcaacataatcccctctccaaaggctgctttctatcttttaagagga
attttcaaacggatctgctgctgctgcttcaactgtaactctactccagactaccctcca
atcacgtctatggatgacaagggctcaggggagaaccgggtttcctacagacagcaggtc
attcgtgctctggttcagcgttacatcgaatctgccaggagagagtttgaagaagccaaa
cgcaaagatgttgggaacaggatcacagagctgagtaaagtgatcagccagctacactca
gaaatgaaacagattcacacgaacatatctgaatactcggacaacgacaaaccagaccca
tcaggagtctcttctttcctggggaagtacatcatcggagccaaaaacaacttcaaggac
ttcgacaacgagagaaggagcgctccgcggcatgaggttgcacaccacgaagaaccagcg
cagactgtaaaagagaagcatgaagaggggtcaccgaccaccaacatagaggcagacggg
acgtcaaatgaagttcaaagcagtgagggagatattggggagggaggaaatgagacagga
attgatgacgccatcgagattagcatgaaggaggagggtgctgagaagagtacaagcgag
acagtcatagatatagagtcccattcagacattgagagtgaagccagtggaaaaagagaa
gatgagacgatgacagagaacaccaaagataatatagaggaactgaatactgatgaggca
acaggaggatcagatctaaatgaagccgagacagaggaaaacaatggaacgacagaagat
attaatgaggatgtagttgaagtggtaagtgaggaaagtactagtcagggcattaagttt
gacctgagccagacaagcctagtgtgtcttttagcaaagaggattgaggaaaagttagcg
aggaaaaccccgctagtgacgaatttcactttcagtggaaagcaagcgtcatctccaact
ggtagcgatggctctcaagacactggttttggttctcaagtatttgagtcctcaactagt
agcccttaa
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