KEGG   Pimephales promelas (fathead minnow): 120494748
Entry
120494748         CDS       T08155                                 
Symbol
zgc:110224
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120494748 (zgc:110224)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pprm03400]
    120494748 (zgc:110224)
DNA repair and recombination proteins [BR:pprm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     120494748 (zgc:110224)
SSDB
Motif
Pfam: XRCC1_N zf-C2HC_2 Zn-C2H2_12
Other DBs
NCBI-GeneID: 120494748
NCBI-ProteinID: XP_039550008
LinkDB
Position
Unknown
AA seq 413 aa
MAPIKIKHIVSFTSQDSKHGVDNLCDGSDSSRPWLCSVQDRSGVLRVELQMERVSPIGFI
DVGNCGSAFIQFDVGRSSWSLDHPYVTLLPTATLMSPADSKQGTGRQNVRMFKKADFLPQ
AAEESWDRLRVSCTQPFNKRLQFGLSFLRIGTMEEEAEGSSVQHEDIADENLHTPDKMTS
VMEWLSSPAIQNTFFGRITGNDSSDAQSQRKAGSLSRAERMVIAAHSTRRSLSTSPCSTT
SSTTPQRSANTKTPPGEFRTSSDQTRTPREQRRKSMARQSLINIGTPLKRPRPAASTHEP
TSTSPPKSVSRHSQSPQDTQESAHQSSPEARCPLCGESFSFDYLPLHASTCLDCDQAELI
EVSPHSSSSVFGSGTDEHMVPCPLCSIRFPPDRIQLHASTCGDTLEPSTVWLN
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggctcccatcaaaataaaacatatcgtctcgtttacttcacaggatagtaagcatggt
gtggataatctgtgtgatggcagtgacagcagcaggccctggttgtgcagcgttcaggac
cgcagtggagtgctgagggtggaattacagatggaacgagtctctcctataggattcatt
gatgttggcaactgtggctctgcgttcattcagtttgatgttggccgctcctcctggtca
ttagatcatccctatgtcaccctgctgcccactgcaaccctcatgagtccagccgactcc
aaacagggcactggtcgccaaaatgtgcgcatgtttaaaaaagctgattttctccctcag
gctgcagaggagagctgggacagactgcgagtctcctgcactcaacctttcaacaaacgt
ttgcagtttggtctgtcctttctgcgcattggcaccatggaggaagaggctgaaggttcc
tcagtgcaacatgaagatattgctgatgaaaatctgcacacaccagacaagatgacatcc
gtgatggagtggctatccagcccagctatccaaaacacgttttttgggcgaatcacaggg
aatgactcctcagatgctcaaagccaaaggaaggctgggagtttgagtcgggcagagcgc
atggtcatagccgcccactctaccagacgctctttgtcaacatccccatgcagtaccaca
tccagcacaacacctcaacgaagcgctaatacgaaaaccccaccaggtgaatttaggact
tccagtgaccaaacgagaacccctcgagagcaaaggaggaaatctatggcacggcagagc
ctcataaacattggcactccactgaagagacccagacctgcagcatccacacatgaaccc
acctcaacaagcccacccaaaagtgtcagcagacacagtcagagcccacaggacacacag
gaatctgcccaccagagctctcctgaggccagatgtcctctttgtggagaatccttcagt
ttcgattatctgcctctccatgcttccacctgcctggattgtgatcaagcggagctcata
gaagtctcaccgcacagcagctcttctgtttttggctctggcacagatgagcatatggtt
ccatgtcctctttgctccatccgattccccccagaccgtatccagctgcacgccagtacc
tgtggggacacgctagagccaagtactgtgtggctgaactga

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