Pimephales promelas (fathead minnow): 120494792 Help Entry 120494792         CDS       T08155                                  Symbol thoc2 Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism pprm  Pimephales promelas (fathead minnow) Pathway pprm03013   Nucleocytoplasmic transport pprm03040   Spliceosome Brite KEGG Orthology (KO) [BR:pprm00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     120494792 (thoc2)   09122 Translation    03013 Nucleocytoplasmic transport     120494792 (thoc2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pprm03019]     120494792 (thoc2)    03041 Spliceosome [BR:pprm03041]     120494792 (thoc2) Messenger RNA biogenesis [BR:pprm03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      120494792 (thoc2) Spliceosome [BR:pprm03041]  Complex C   Other components    EJC/TREX     120494792 (thoc2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     120494792 (thoc2) SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  120494792 NCBI-ProteinID:  XP_039550056 LinkDB All DBs Position Unknown AA seq 1564 aa AA seqDB search MAALILPSDWIKNWDKSGKNEFLQFFQDLAGKPSGQEFVKDLQSGLYELCWHVIQGNLKV DVAAGLLADVMELRDDMASVLADVFCILDIETGCLEEKHKRDHFTQLVGACLICVPDGVL KERLDPETLETLGLIKQAQQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL TGSLTSHIVLENIKSLIGCFNLDPNRVLDIILEVYECRSDHDEFFIPLIKSYMCEHQTLC HMLGFKFKFHQEPNGETPSSLYHVAAALLQHNLIALEDLYAHLLPLNSSIVEEHKRENLE AKQIARKLTMVVVPSEKSEDKEKEKEKEEEKNEKPPDNQKLGLLEALLKIGDWQHAHSIM DQMPAFYATSHRAIAIALCQLLHLTVEPLYRRAAVPKGAKGGLMRPLRNKQAPRPAETFE DLSRDVFTMLCYLGPHLSHDPILFAKIVRLGKSFMKEYQAESRQEIKDKTDTLLSCFLSI ADQVLLPSLSLMECNACMSEEIWGFFKLFPYQHRYRLYGQWKNETYGHHPLLVKIKAQTV DRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQWYDNLITPVVDSLKYLTS LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN QLKAGKSFDLLILKEVVQKMAGIEITDEMTVEQLEAMTGGEQLKAEGGYFGQIRNTKKSS QRLKDALLDHELALPLCLLMAQQRNGVVFSEGGEKHLKLVGKLYDQCHDTLVQFGGFLAS NLSTEDYIKRVPSVDILCNQLHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV HKYIAACEQIMAPVHEAVVSLHLPKVWDDLRPQFYATFWSLTMYDLAVPHNAYDREVNKL KMQIKAIDENTEMPLNKKKKEKERCTALQDKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA KSTKNETITKFLQLCIFPRCVFSAIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSDIIY TVASCTENESRRYGRFLCCMLETVTRWHSDRAIYEKECGNYPGFLTIFRASGFDGGNKAD QLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALEC RVHKICQEEKEKRPDLYALAMGYSGQLKGRKVHMVPENEFHHKEQPVRSATPGTLQNGPG NAGKPANTAAASAGKAEDGAVDDSDKSKDKSQAAQKTASKNSTAANKVSSSNGNSTPNST KGSKEKEDKEKTTKEKKEKKEKNPGSTPEAKAGGKDKQKEERSKEEKPIDSKEKTPKAEK EKRKEDKKEEKSKMDGKSAEKEWPKEREVSSDIKTKESKLEKSAGAGSLKSLVPRSEGVE SERAEQKRRKLDTHSSPSHSSAVKDSLNDLKDSASKHHPNHSTVLSKSKEKDDEKKESDK PRDRSKEREKKEDRKERKRVSASDYANSDREMSQEAKRRKDENGMNSSKHSKSASPSESP PANDKDNGKRSKSTSKDKGDLAKPEKTSGGKKESRHDKEKSEKKRDSTGAKEEKKHHKSS EKHR NT seq 4695 nt NT seq  +upstreamnt  +downstreamnt atggcggcgcttatcctcccgtctgactggataaaaaactgggacaaatcgggcaaaaat gagtttttacagtttttccaagaccttgcaggaaaacccagtggtcaagagtttgttaaa gatctgcagtccggcctgtatgagctctgctggcatgttatccagggcaatctgaaggtg gatgtggccgccggtctcctggctgatgtcatggagctgcgggacgacatggcttctgtt ttagctgatgttttctgtatattagatattgagaccggctgtttggaggagaaacacaag cgagatcattttacccagttggttggagcctgtttgatctgtgttcctgatggtgtgctg aaagagagactggatccagaaacgctggagactctgggactgatcaaacaggctcaacag ttcaaccagaagattgtcaaaatcaagaccaaactattttacaaacagcagaagttcaat ttgctgcgtgaggagaatgaaggttacgctaagctgatcacggagctcgggcaggatctg accgggagtctcaccagccacatcgtcctggagaacatcaagtccttaataggatgcttc aacctggacccgaaccgagtgctggacatcatcttggaggtgtacgagtgtcgctcggac cacgatgagttcttcatccccctgatcaagtcctacatgtgcgagcaccagaccctctgc cacatgctcggcttcaagttcaagttccaccaggagccgaatggagaaacgccatcatct ctgtaccacgtcgctgcagctcttcttcaacacaacctcatcgctcttgaagacctctac gctcatctcctcccactgaactccagcatcgtggaagagcacaagcgggagaacctggag gccaagcagatcgcccgcaaactcaccatggtggtcgtgccctccgaaaagagcgaggac aaggagaaggaaaaggagaaggaagaggagaagaatgagaagcctcctgataaccagaag ctgggtctgctggaggctctgctgaagatcggggactggcagcacgctcacagcatcatg gatcagatgccagccttctacgccacctcccacagggccatcgccatcgctctgtgccaa ctgctccacctgaccgtggagccgctctaccgcagggctgcggtccccaaaggtgccaaa ggtggtttgatgaggcctctgaggaacaaacaggcccctcgcccggccgaaaccttcgag gacctctccagggacgtgttcaccatgctgtgttacctgggccctcacctgtcccatgac cccatcctcttcgccaagatcgtgcggctgggcaagagtttcatgaaagagtaccaagct gaaagcagacaagaaatcaaggacaaaacggacactctgctgagctgttttctcagtatt gctgatcaggtgttgttaccgtctctctcactcatggagtgcaacgcctgcatgtctgag gagatctggggcttcttcaaactcttcccctaccagcacaggtatcgcctctatgggcag tggaagaacgagacgtatggtcatcaccccctcctggtgaagatcaaggctcagacggtg gacagagccaaatacatcatgaagcgactgactaaggagaacgtgaagccctcaggaagg cagattggaaagttaagccacagtaaccccaccattctctttgattatatcctgtctcag atccagtggtacgacaacctgataactcccgtggtggactctctgaaatacctcacctcc ctcaactacgatgtgctggcctattgcattattgaagctttggccaacccagagaaagag aagatgaaacatgatgacacgaccatttcatcatggctgcagagtctcgctagtctttgt ggagcggttttcaggaaatatcccatcgagttagccggtcttctgcagtatgtgaccaac cagctgaaagcaggaaagagcttcgacctgctgatcctgaaggaggtcgtgcagaagatg gcaggaatcgagatcacggatgagatgaccgtggagcagctggaggccatgacgggcgga gaacagctcaaagcagagggtggctactttggtcagatcaggaacactaagaagtcgtct cagcggctgaaggacgccctgctggaccacgagctggcgctgccgctgtgtctgctgatg gcgcagcagaggaacggtgtggtcttctcggagggcggagagaagcacctgaaactcgtc gggaagctctacgatcagtgtcacgacacccttgtgcagttcggaggcttcttggcgtct aacctcagcacagaagactacatcaagcgggtgccgtcagtggatatcctgtgcaaccag ctccacacgccccacgacgccgccttcttcctctctcggcccatgtacgcccatcagatt ctgtccaagtatgacgaactgaagaaggcagagaagggcaaccggcagcagcagaaggtc cacaagtacatcgccgcctgcgagcagattatggcccctgtgcacgaggccgtcgtgtct cttcacttgcccaaagtgtgggatgaccttcgaccccagttttacgccaccttctggtcc ctcaccatgtacgacctggcggtaccgcacaacgcctacgaccgggaggtcaacaagctg aagatgcagatcaaggccatcgatgagaacacagagatgcctctgaacaaaaagaagaaa gagaaggagcgctgcacagctctgcaggacaagctgcaggaggaggagaagaagcagctg gagcacgtgcagagagtcctgcaccgcctcaaactggagaaggacaactggttactcgcc aaatccaccaagaatgaaaccatcactaagttcctgcagctctgcatcttcccccgctgc gtgttctctgccatcgacgccgtttactgtgctcgcttcgtggagctggtgcaccagcag aagacgcccaacttctgcacactgctgtgctacgacagagtgttttcagacatcatctac acggtggcgagctgcacggagaacgagtcgcggcgctacgggcgcttcctctgctgtatg ctggagactgtgactcgatggcacagcgacagggccatctatgagaaggaatgtggcaat tacccagggttcctgacaattttccgagccagtggtttcgacggagggaacaaagcagat cagctggactatgagaacttccggcatgttgtccacaaatggcattacaagttgactaaa gcgtctgtgcactgcctggagacgggcgagtacacccacatccgcaacatcctgatcgtg ctcaccaagatcctgccctggtaccccaaggtgctgaacctgggccaggctctggagtgc cgcgtccacaagatctgccaggaggagaaagagaagaggcccgacctctatgcgttagcc atgggctactctggccagttgaaaggcaggaaagtgcacatggtgcctgagaatgagttc caccataaggagcagccagtgcgcagcgccacgcctggcactctgcagaacggaccgggc aacgcgggcaaacctgccaacaccgccgctgccagcgctggcaaagccgaggacggggcc gtcgacgactcagataaatccaaggacaaatctcaggcggctcagaaaactgccagcaaa aacagcaccgcagccaataaagtgagcagcagcaacggaaacagcacgccgaacagcact aaagggagcaaagagaaggaagataaagagaagaccaccaaggagaaaaaggagaagaaa gagaagaacccaggaagcactccagaggccaaggcaggagggaaggacaaacagaaggag gagagatccaaggaggagaaacccatcgacagcaaggagaagacacccaaggccgagaag gagaagaggaaggaggacaagaaggaagagaagagcaagatggacgggaaatctgctgaa aaagagtggcccaaggaacgtgaggtgtccagcgacatcaagacaaaggaaagcaagctg gagaagagcgctggggctgggagcctgaagtccctcgtgcccagatccgagggagtcgag tctgaacgggcagagcaaaaaagacgaaagcttgacactcactcgtcaccgtcgcactcc tctgcagttaaggacagtctcaacgacctcaaggactccgcttcaaagcaccatcctaac cacagcacagtcctgtccaagagcaaagagaaggacgacgagaagaaagagtctgacaaa cccagggaccgctccaaagagagggagaagaaggaagaccggaaggaaagaaaacgcgta agtgcttctgactacgcgaacagcgaccgcgagatgagccaggaagccaagcgccgcaaa gatgagaatggaatgaactcctccaaacacagcaagagcgccagcccctccgaatcgcct cccgccaacgacaaggacaacggcaaacgctccaagtccaccagcaaggacaaaggcgat ctggccaaacccgagaagacctctggaggaaaaaaggaatccaggcatgacaaggagaaa tcggaaaagaagagagacagcactggtgctaaagaagagaagaaacaccataaatcatca gagaagcacagataa

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