Pimephales promelas (fathead minnow): 120494815
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Entry
120494815 CDS
T08155
Symbol
usp53b
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase 53
KO
K27919
inactive ubiquitin carboxyl-terminal hydrolase 53
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120494815 (usp53b)
Cilium and associated proteins [BR:
pprm03037
]
Other cilia and associated proteins
Stereociliary proteins
120494815 (usp53b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
120494815
NCBI-ProteinID:
XP_039550084
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MAWVKLFKKPGGNMAGTGTGALSGTGLGKSYQPGSMISLALTKGLLNEPGQNSCFLNSAV
QVLWQLDIFRRSIRHLSGHFCLGDACIFCALKSIFCQFQQSRERALPSDTLRHALAETFK
DEQRFQLGLMDDAAECFENILERIHLHIVSDSSTEFCTSKSCITHQKFAMTLYEQFVCRS
CGASSDPLPFTELVHYVSSTALCQQVERILEKTDRLRSDMFGELLQAANTIGDLRNCPSN
CGQRIKIRRVLMNCPEIVTIGFVWDAEQSDLTEDVIRSLGPNLNLSGLFYRVTDENAKKR
DLHLVGMICYSSRHYLAFAFHSKSSKWIFFDDATVKEIGSKWKDVASKCIRGHFQPLLLF
YANPDGTAVSNEDAPRQTTMWSRYNSPLNGKGTDTQLSSSKKLDSLRDVSAGSQRTNQGS
HKTPMQSSSNRLLPESPCKFRESSRDFSHRGGGQRKDSERSYRKSDSLQHKDMTYTLSSS
PPENGQRFHSDQRQRTLPSRVSRPEHSSVHVRVSPQELRSNQGLATGTSRHIDSSSLCHR
GSTNLPERGKSKPSWRPVREVLNVDSVLSELEQRQQQQQRGSPRCVRRFGHERGLIKEKQ
KGLMTIYEDDSRLETESQSSQESQRQIMVTRPKGGANVAQRSDNWMIQRTESGYESSDRL
SSGSTNPDSPGVENFTGKELKLSEEAQHLRDQGHNNQGDSKMEGVRSPLYHSKHLVKIQG
KNSEHLMKGSPSSRRKLRYSSCGARKGGYAEKDPSAGNLQVEQQEVSMRWHHSPESPLLR
RLGKISSLECNSSDELTNPLSEQEDSAYRSSTSEVAPHESPGPNGTIYPLQPREESAIAP
SMPTHSKHGQRPIEIKTPPFRPRILQEPSQTASRASDRGVSSLHTTAVHKRMEINGTCPS
SSDVSSKSCSDQERGEQVSCQPEERSCGWDKPSASVSPGSGVALTTYFSVDNCMTDNYRL
KYHHQRPLVLSMPEPRGAVKDGRDTGHSSRIENQSERAKNKSDSGNSINKPTAKWHPVTS
KGLDEHGYL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcatgggtcaaactttttaaaaagcctggaggcaacatggctgggacaggtacaggt
gccttgagtggaacagggctgggcaagtcctaccagccgggcagtatgatctctctcgct
ttgaccaaaggtcttctaaatgagccaggccagaacagctgcttccttaacagtgctgtg
caggttctttggcagcttgacatctttaggaggagcatacgacacctatctggccatttc
tgcttgggagatgcctgtattttctgtgctttaaagagcattttctgtcagttccagcag
agtcgagagcgggctctgccatcagacaccctgcgtcacgctctagccgagacctttaaa
gatgagcagcgcttccagctgggcctcatggatgatgcagctgagtgttttgagaacatt
ctagaaaggatacacctgcacatcgtttctgactcatccacagaattttgtacttccaaa
tcatgcatcactcaccagaagtttgccatgactctctatgagcagtttgtttgtcgtagt
tgtggagcatcatcagaccccctccctttcactgagcttgtgcactatgtgtcctccacg
gccctctgtcaacaagtggagcgaatcttggaaaagacagacagactgcgctcagacatg
tttggtgaactgctgcaggcagccaacaccattggagatctccgcaactgccctagtaat
tgtgggcagaggataaaaatccgacgtgtgctaatgaactgcccagagattgtcaccatt
ggctttgtgtgggatgctgaacagtctgatctcactgaagatgtcatccgctctctgggc
ccaaacctcaatctttcagggcttttttatagagtcactgatgaaaatgcaaagaaaaga
gatctccacctggtgggaatgatctgttactctagtcgacattatctagcattcgctttt
cacagcaagtcttccaaatggatattttttgatgatgctaccgtgaaagagattggctcc
aagtggaaagatgtggcatctaaatgtatccgaggtcacttccagccactcctcttattc
tatgccaacccggatggtactgcagtgtccaatgaggatgcccccagacagaccaccatg
tggtcccgttataactcccccctcaatgggaaagggacagacactcagctgtcaagctct
aagaaactggacagtttgagagatgtgagtgcaggttcccaacgaacaaatcagggatcc
cacaaaacaccaatgcaatcatcatccaatcgtttgcttccagaaagtccctgcaagttt
cgagagtcttccagagatttttctcaccgtggaggaggacagaggaaagacagtgaaaga
agctaccgaaaatcagactctctccaacacaaagatatgacatatactctatcatcttct
ccccctgaaaatggccaaaggtttcattctgaccagagacagagaactctcccctcacga
gtctctcgacctgagcattcttcagtacatgttcgcgtatcaccccaggagttacgctca
aaccagggactggccactggcacaagccgtcacattgattcatcatctctctgccatcgt
gggtccacaaatctccccgagcgtggcaagtccaagccctcatggagaccggtgcgagag
gtactgaatgtggacagtgtgctgagcgaactagaacaacgtcagcagcagcaacaacgt
gggagccctcgatgtgtccgccgctttggccatgagagagggctgataaaggagaaacaa
aaaggtctgatgactatttacgaagatgactcgcgtttggagactgaaagtcaaagctcc
caggagtctcagcgacagataatggtgaccagacctaaaggtggagcaaatgtcgcacag
cggagtgataattggatgatccagaggacagagtcaggatacgagagcagtgataggttg
agcagtggttccaccaatcctgactcaccaggtgttgagaacttcacaggcaaagagctc
aaactcagtgaagaagcacagcacctcagggatcaaggccataataatcaaggggattca
aaaatggagggagtgcgttctccgctgtatcacagtaagcatttggttaaaattcaggga
aagaactcagaacatctcatgaaaggcagtccaagttcaagaaggaagcttagatactca
tcctgtggtgccaggaaaggggggtacgcagagaaagacccatcggccggcaaccttcaa
gtagagcaacaggaagtttccatgcgatggcaccacagtccggaaagcccccttctgcgc
cgcctgggcaagatcagcagtttagagtgtaacagttctgatgaactcactaaccctctt
tcagagcaggaagacagtgcttatcgttctagcaccagtgaagtcgctccacacgaatca
ccgggtcctaatggcaccatttaccctttgcagccgagggaagagtcagcaatagctcca
tcaatgccaactcattccaaacacggacagcgaccgattgagataaagactccacccttc
cgtcccagaattttacaggagccatcacagacagcatccagagcatccgaccgtggcgtt
tcatcgttgcacaccactgcagtacacaagagaatggaaatcaatggcacatgcccaagc
tcatcagatgtgagctcaaaatcgtgttcggaccaggaaagaggggagcaggtgtcctgc
cagcctgaggaaagatcttgtgggtgggataagccatctgcctcagtgtctccaggatct
ggagtagcactgaccacttatttctccgtggataattgtatgacagacaactacagacta
aagtatcaccaccagaggccgttggtcctctccatgcctgagccgagaggagctgttaag
gacgggagagacacgggacattcaagccgcatagagaaccagtctgaacgtgccaaaaat
aagtctgactctggcaatagcatcaataagcccactgctaaatggcaccctgtcacttca
aaagggctagatgaacatggatatttgtga
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integrated database retrieval system
