Pimephales promelas (fathead minnow): 120494871
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Entry
120494871 CDS
T08155
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120494871
Enzymes [BR:
pprm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120494871
Spliceosome [BR:
pprm03041
]
Complex C
Other components
Complex C specific factors
120494871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
FtsK_SpoIIIE
Cas3-like_C_2
AAA_29
AAA_16
AAA_30
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
120494871
NCBI-ProteinID:
XP_039550147
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MAAPHNTMKFWKPGSEAPGVCEERDLSTETTGSPIIFNPHTALSIEKQRQRLPVFKHRNN
ILYVVESFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGKVIGVTQPRRVAVTSVASRVAE
ERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPLLKKYSVLMLDEAHERT
LYTDITIGLLKKIQKKRRDLRLIVASATLDAKKFQDFFNLNETGDPNKDTCGILTVEGRS
FPVDIFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQEQARTLS
RYGMKKHLCVLPMYAGLPYSEQMRAFERMPPTVRKVVVATNIAETSITINGVVFVIDCAF
VKLRAYNPVTAIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEEDFEKLPESTVPEM
QRSNLAPVILQLKALGIDNVLRFNFLSPPPAQSMVQALELLFALGGLDQYGRLTDPMGVR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNLFTVPHNQRKAAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLHYKGLLRAVAVREQLRHLLNKFKVPRTSSEGD
PDVILRCIVSGFFANAARMHHSGSYRTLRDDRELFIHPDSVLFGEKPPKWVVFNEVVQTS
KYYMRDVTAVESSWLVELAPHFYKQAKHGSLSSKRAKVF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccccacaacaccatgaaattctggaaacccggctcagaggctccgggtgtg
tgtgaggagagagatctgtccactgagaccaccggctcgcccatcatcttcaacccgcac
acggctctctccatagagaaacagaggcagaggctgcctgtcttcaagcacagaaacaac
atcctctatgtggtggagagtttccagactgtggtgattgttggagaaacaggatctggg
aaaagcacacaaatcccacagtatctgctggaggccggctgggctgcggaggggaaggtg
atcggcgtgacgcagcctcgacgcgttgcggtcacctctgtggccagccgcgtagcagag
gagagaggggcgtttctcgggcacgaggtgggatacaccatcaggttcgatgactgctca
gacccacacgccactcgcataaagtttctgacagatgggatgctggttcgggagatgatg
tctgacccgctgttgaagaagtacagtgtgctgatgctggacgaagcgcacgagcggacg
ctgtacacggacatcaccatcggcctgctgaagaagatccagaagaagcggagagacctg
cgcctgatcgtagcctccgccactctggacgccaagaaatttcaagatttcttcaacctg
aatgagaccggagacccaaataaagacacctgtggcattctgacggtcgagggccgctcg
ttcccggtggacatcttctacactgtcagtcctgtgccagactatgtgaaggcgacggtg
gagaccgtgctgaagatccacgagaccgaggacgacggagacgtgctggcgtttctcaca
ggacaggaggaggtggagaaggtggtgtctctgctccaggaacaggcgcgcaccctgtcc
cgctacgggatgaagaagcacctgtgtgtgttgcccatgtacgcgggcctgccctacagc
gagcagatgagggcgttcgagaggatgccgcccactgtcagaaaggtggtggtcgcaacc
aatatagcggagacctccatcaccatcaacggggtggtgtttgtgatcgactgtgcgttt
gtgaagctgcgggcgtataatcccgtgaccgcgatcgagtctctgatcgtgacgcccatc
tctaaagcctccgcctgccagagagccggccgcgccgggaggaaccgcgccgggaagtgc
ttccgcctctacaccgaggaggacttcgagaagctgccggagtccacggtccccgagatg
cagcgctcgaacctggctccggtcatcctgcagctcaaagccctgggcatcgacaacgtg
ctgcgcttcaacttcctctcccctcctcccgctcagtccatggtccaggctctggagctg
ctcttcgctctcggaggtctggaccagtacgggcgcctcacggacccgatgggggtgcgg
atggccgagttcccgctcagtcccatgttcgccaagatgctgctggagtcggggaacttc
ggctgctccaaggagatcgtcaccatcgctgccatgatgcagattcagaacctgttcacg
gtgccacacaatcagaggaaagcagctgcgcgggagcaccggaagtttgccgtggcggag
ggggatcatctcaccatgctgaatgtgtatgaggctttcataaagcaccagaagagttcg
cagtggtgtcaggagcacttcctccactataaaggtctcctgcgggccgtggccgtgcga
gagcagctgcgacacctcctcaacaagttcaaggtgcctcgcacctccagcgagggtgac
ccggacgtgattctccgatgtatcgtgtctgggtttttcgcgaatgcggcccgtatgcat
cactccggctcctacaggactctacgtgacgaccgagagctgttcatccaccccgattcg
gtgctgtttggagaaaagcccccaaaatgggtggtcttcaatgaggtggttcagaccagc
aagtactacatgcgggacgtgacggcggtggagtcgtcctggctggtggagctggcgccg
cacttctacaaacaggccaagcacgggtctctgagcagcaaacgggccaaagtcttctga
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