Pimephales promelas (fathead minnow): 120495036
Help
Entry
120495036 CDS
T08155
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120495036 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprm03310
]
120495036 (rorc)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120495036 (rorc)
Nuclear receptors [BR:
pprm03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
120495036 (rorc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120495036
NCBI-ProteinID:
XP_039550338
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MENDEPASPDPNHDNTQRGNPVHKKSHLTQIEVIPCKICGDKSSGVHYGVITCEGCKGFF
RRSQSSSVQYSCSRQSNCPIDRASRNRCQSCRLKKCVAQGMSRDAVKFGRMSKRQRDSLF
AEVERHRQQQRLQANSVTEPQSLPSYRSGKEPREQTSHLIPPLPQAYPYSVEPELPGCPP
EVHPYLECRIGEAQAQSLAYRVSHRRGESNSLSAGRGFDSTRSTPETILNMSGGEMGFRP
FDPESSFFSYPTSLHIEELSASIVRSHRETTQYRPEELQALRWKVFSREEIHAYQSKSVD
EMWQHCAVRLTDAVQYVVEFAKRIPGFRQLCQNDQIALLKSGSMEVVLVRMSRMFNTENN
TVFFDGKFAGTELFKSLVCSDLIAAVFDFAHNLCALRLTEQQMALFTALVLINADRPCLE
DRERVQKVRRDVELALNHIMHRDNQESLLDKLYQRVPMLKSLCTLHIEKLRWFRQLYPLT
VHSLFPPLYKELFGSDADTQSLTSH
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgatgagcccgcgtcgccggacccgaatcacgacaacactcagagaggaaat
cccgtgcacaagaaatcccatctgactcagattgaggtgatcccatgtaagatctgtgga
gacaagtcttcaggggttcattatggagtcatcacatgtgagggctgcaagggcttcttc
cgcagaagtcagtcctccagcgtgcagtactcgtgctccaggcagagcaactgccccatc
gaccgcgccagccgtaaccgctgccagagctgccgcctcaaaaaatgtgtcgctcagggg
atgagccgcgatgctgtgaagtttggccgcatgtccaagcgtcagagagactcgctgttt
gcagaagtcgagagacatcgacaacagcagcgtcttcaggccaactcagtcacagagcct
cagtctctcccatcctaccgatccggcaaagagcccagagaacagacatcacatctcatc
ccacctctacctcaagcctacccttattctgttgagcctgaactgccaggttgcccacca
gaggtacatccatacctggagtgccgcataggcgaggcccaggctcagagtctggcctac
agggtttcccacaggagaggtgagagcaacagcttgtcagcaggtagaggatttgactct
acaaggtctacacccgagactattctgaacatgagcggcggtgaaatggggtttcgtcct
ttcgaccctgagagctcgttcttttcctatccgacctctctgcacatagaggagctctct
gcaagtatcgtacgttctcacagagagacgactcagtatcgaccggaggaactgcaggct
ctcagatggaaggttttcagcagggaggagatccatgcgtaccagagcaaatcggtggat
gagatgtggcagcactgtgcggtgaggttaaccgatgccgttcagtatgtggtggaattt
gctaaacgtatcccaggattccgtcagctttgtcagaatgatcagattgctctcctcaag
agtggatcaatggaagtggttctggttcggatgagtcggatgtttaacacagaaaacaac
acagtattttttgacggcaaatttgcaggaacagaacttttcaaatctctcgtgtgtagc
gatctaatagctgctgtatttgactttgctcacaatctgtgtgcgctgagactgactgaa
cagcagatggcgctgttcactgcactggtcctcatcaatgcagatcgaccatgtctggaa
gaccgagagagagtgcagaaagtaaggagagatgtggagcttgcccttaatcacatcatg
cacagagacaatcaggagagtctgctggataagctgtatcaaagagtgccgatgttgaag
tctctgtgtactctgcatattgagaaactgcgatggtttcggcagctttaccctctcacg
gtgcattccctcttccctccgctatacaaagagctgttcggctctgacgcggatacacag
tccctgactagtcactaa
DBGET
integrated database retrieval system
