Pimephales promelas (fathead minnow): 120495071
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Entry
120495071 CDS
T08155
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120495071 (trim71)
04121 Ubiquitin system [BR:
pprm04121
]
120495071 (trim71)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120495071 (trim71)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120495071 (trim71)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120495071 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4
DUF5711
zf-RING_2
Invasin_D3
Ig_GEX2_N
DUF4094
BBP1_C
Motif
Other DBs
NCBI-GeneID:
120495071
NCBI-ProteinID:
XP_039550402
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MCEVILWSSAQMASFPDSDLQTCPLCKELCGCSAPISSNSSTSSSSSQTSNSSTSSTRRL
HVLPCLHAFCRQCLEGHRSPGDPLKLRCPTCDQKVSLSESGVDSLPSSTFLFSNLLDVVV
SAEEQGKNGRSSSVVHHGGLLRPQHLSDPQCSSCDEGNPATSHCLDCQEYLCDNCVRAHQ
RVRLTKDHFIEGLMESLHLVNRTINSNTPVNISQSFHNSFSMLNVFQERVEFCQQHENAV
LRFFCDSCSMPICRECSLGRHAGHSFTYLQEALQDSRALTIQLLADAQQGRQAIQLSIEK
AQAIAEQVELKAKVVQSEVKTITLRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLH
QNLTKLDSTIATVTQVLEEGRSIDVLLAREHMLNQLQELKSLRCFLQPQEDDRIMFTPPD
QALLIAIKSMGLISSGAFATASKAHGEGLKRALQGKLASFTVVGYDHDGEPRLSGGDSVS
VVLMNPDGNLSSADVSDHQDGTYTVSYLPKSEGEHLLSVLVCNQHIEGSPFKVMVKSGRS
YGGVGLPIATFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHRFGT
LGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFSFDGQFLVKFGEKGTKNGQFNYPWD
VAVNSEGKILVSDTRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTD
FNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPNG
NFLCKFGTQGSGFGQMDRPSGIAVTPDGMIVAVDFGNNRILVF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaagttattctgtggtcctctgcacaaatggcgtctttcccagactccgacctg
caaacatgtccgctgtgcaaggagctgtgcggctgctctgctccgatctcctccaattca
tctacctcctcctcttcctcacagacctccaactcatctacctcatccaccaggagactg
cacgtcctgccctgtctgcacgccttctgcaggcaatgcctggagggccaccggagcccc
ggtgaccccctgaagctaagatgccccacatgcgaccaaaaagtgtctttgtcggaatca
ggcgtggactcgctgccctcctccacctttctgttcagcaaccttctggatgtggtggtc
tctgctgaggaacagggcaagaacgggcggtcttcatcggtggtccatcacggtggtctt
ctgagaccccagcacctctcggaccctcagtgcagctcttgtgatgaggggaaccccgct
acctctcactgcctggattgccaggagtacctgtgcgataactgcgtgcgggcccaccag
agggtccgactcaccaaagaccacttcatcgaggggctgatggagagcttacacctggtc
aaccgcaccatcaactccaacacccccgtgaacatctcccagtccttccataacagcttc
tccatgctgaatgtgttccaggagagggtggagttctgccagcaacatgagaacgcggtg
ctgcgctttttctgcgacagctgctccatgccgatctgcagggagtgcagcttgggccga
cacgcaggtcacagtttcacctaccttcaggaagcactgcaggactccagagcgctgaca
atccagcttctcgcagacgcacaacagggtagacaggccatacagctgagcatcgagaaa
gcccaagccattgctgaacaggtggagctgaaggctaaggttgtgcagtcagaagtgaaa
accataactctacgtcataagaaagctctggaggaacgcgagtgtgagctgctgtggaag
gtggagaagatccgccaggtgaaggcaaaatcactttacctgcaggttgagaaactacac
cagaatctcaccaagctggatagtactatcgccacagtgacgcaggttttagaagaaggc
cgtagcatagatgtcctgctagcacgtgagcacatgttaaatcagctacaggagcttaaa
tctctccgctgcttcctgcagccccaagaagacgatcgcatcatgttcacccctccggac
caggctcttctgattgccatcaagtccatgggcctcatcagcagtggagcctttgccaca
gcatccaaagctcatggtgaaggcctcaagagagcactgcaaggaaagctagcttccttt
actgtcgtagggtatgatcatgatggtgaacctcggttgtccggtggtgacagcgtctcg
gttgtgcttatgaatccggatggtaatctgtccagcgcagatgtttctgatcaccaagat
ggaacgtacacagtcagctatctgcccaagagcgagggtgagcatttgctctcggtgctt
gtatgcaatcagcacattgagggaagtccattcaaagtgatggtcaagtccggccgcagt
tacggcggcgttggcttgcccattgcaacctttggaggagagggcgatggggacgggcaa
ctgtgtcggccttggggcatctgcgtggataaggagggctacgtggtggttgccgaccga
agcaacaaccgcgtgcagatcttcaagccttgtggcacgttccaccacaggtttggcact
ttgggctcacgaccgggccagtttgaccgcccagctggggtcgcctgtgacagccagagg
agaatcattgtagcagataaggacaatcaccgcatccagattttctcattcgatggccag
tttcttgtcaagtttggcgagaagggaaccaaaaatgggcaattcaactacccgtgggat
gttgccgtcaactccgagggaaagatcctggtttcggatacacgcaaccaccgcgtgcaa
ctctttgggcctgacgggactttccttaacaaatacggattcgaaggtgccctctggaaa
cattttgactcgcctcgcggtgtagcttttaatcaggaaggccacctcgtcgtgaccgac
ttcaacaatcatcgactgcttgtcatcaggcccgattgccagtcagcacgcttccttggg
tccgagggaaccggaaatggacagttcttgcgcccgcaaggcgtagccgtggaccaggag
gatcgtattatcgtggctgactcccgcaaccatcgcattcaggtgttcgaacccaatggc
aactttttatgcaagtttgggactcaagggagcggcttcggccaaatggatcgcccctct
ggtatagcggttactcctgatgggatgattgtggctgtggactttggaaacaaccgaatc
ctcgtgttctga
DBGET
integrated database retrieval system
