Pimephales promelas (fathead minnow): 120495084
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Entry
120495084 CDS
T08155
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120495084 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120495084 (prpf3)
Spliceosome [BR:
pprm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120495084 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
DUF4011
TPX2
Motif
Other DBs
NCBI-GeneID:
120495084
NCBI-ProteinID:
XP_039550421
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MSLPKREVDELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDDSAS
SFVERLFEALEESKNSRGNKGAGEKNRKRELKEVFGDEVEGVKDGHSVDTGVKKKRVPRF
EEVDEPAVLPGPPTESPGMLTKMQIKQMMEAATRQIEERKKQLSIVAPVSQPRMTQSQTD
SSSTRSNLPAGGATQSIAPSQAANFMNDAIEKARKAAELQAKIQSTLAMKPGILGALGNT
GPHNLVALANLHAMGIAPPKVEPREITKPTPLILDELGRTVDASGKEVELTHRMPTLKAN
IRAVKREQFRQQLKEKPSDDLESTSYFDSRVALTPAQRAKKGFRFHEQGRFEKIAQRIRT
KAQLEKLQMEIAQAAKKTGIQASTKLALIAPKKEMGEGEIPRIEWWDSYILPSHIELTAS
TNLDEVELHGVTNLLEHPIQMAPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGQKEVQEK
VRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTTE
QRKEKKVKKLKEDLSHGVHIAVYRIRNLYNPAKKFKVEANANQLYLTGTVVLHRDLNIVV
VEGGPKSQKKFKRLMLSRIKWDEPNSKRDEPQDSDDEGSRKNNKCTLVWEGTAKERSYGE
VKFKQCPTENMAREHFKKHGTEHYWDLALSQSVLETTDD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccaagcgtgaggttgatgagctgaggccatgggtggaacgcacagtaaag
aaggtccttggtttttctgaacccactgtggtgacagcagcgttacactgtgtgggaaaa
ggcctggacaagagaaaaaccacagaccaactaagaccgtttcttgatgattcagcaagc
agctttgttgagcgtctgtttgaagctcttgaggaaagcaaaaactcccgtggcaataaa
ggagctggagagaagaaccgcaaaagggaactaaaggaagtgtttggagatgaggtggaa
ggagtaaaggatggacacagtgtggatacaggggtaaagaagaagagagtacctcgcttt
gaggaggtggatgaaccagctgttttacctggaccccctacagagagtcccggcatgctt
accaagatgcagataaagcaaatgatggaagcagccacacggcagattgaggagagaaag
aaacagcttagtattgtggctcctgtctcacagcctagaatgactcaatctcagacggac
tctagttctacacgttccaacctcccagcggggggtgccacgcagtccatcgctccctct
caggctgctaacttcatgaatgacgctatagagaaagcccgcaaggcagctgagctgcag
gccaagatccaatccacactggccatgaaaccaggaattctgggtgctttgggcaacaca
gggccacataacctggtagccttggccaacctgcatgccatgggcatcgcaccacctaaa
gtggagcctcgtgagattacaaagccaactcccctcattctggatgagcttggacgaact
gttgatgccagtgggaaagaagttgagctcacacatcgtatgcccactctaaaagcaaac
atcagagcagtgaagagggaacagtttcggcagcagttaaaggaaaaacccagcgatgac
cttgaatcaacgtcttacttcgactcacgtgtggcccttacacctgcacagagagccaag
aaaggctttaggttccatgaacaggggcgctttgagaagatcgcccagcgtattcggacc
aaggctcagctggagaagctacagatggagattgctcaggctgccaagaagacaggcata
caggcctccactaaacttgctcttattgcccccaagaaagagatgggagaaggcgagatt
cctcgtatagagtggtgggactcctacatcttgccttcccacatagaattaactgcgtct
acaaacttagatgaggttgaattgcatggagtcaccaacctacttgaacaccctattcag
atggcccctccagtggatacagataagccagtgactctgggtgtgtatttgactaagaaa
gaacaaaagaagttgaggagacagacacgtagagaaggccagaaagaggtgcaggaaaag
gtccgattgggtcttatgccgccacctgaacccaaagtgcggatctctaatctgatgagg
gttttggggacggaagctgtgcaggaccccactaaagtggaggctcatgttagagcacaa
atggccaagaggcagaaggcccatgaggaggcaaatgcagcacgcaaactcacaacagaa
caaaggaaagagaagaaggtgaagaaacttaaggaggatttgagtcatggagttcacatt
gctgtgtacagaatccgaaatctgtataacccagccaagaagtttaaggtggaggccaat
gcaaaccaattgtaccttactggcactgtagtactgcacagagacctcaacattgtagta
gtggagggaggacccaagtcacagaagaagtttaaacgactgatgctgagtaggattaaa
tgggatgagccgaattccaagagagatgaacctcaagattcagatgatgagggttccagg
aagaataataaatgcaccttggtttgggagggtacagccaaggaacgtagctacggggag
gttaaatttaagcagtgtcctacggaaaacatggctagggaacattttaagaagcatggc
accgaacactactgggacttggctctgagtcagagtgttctggagacaactgacgactga
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