Pimephales promelas (fathead minnow): 120495176
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Entry
120495176 CDS
T08155
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120495176 (zeb1a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120495176 (zeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
120495176
NCBI-ProteinID:
XP_039550531
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MADGPRCQRRKQTQPQRNNVRSLSSVPEATSDSDDEDKLHIVEEDNIADDPDQKSSVFQL
KAARQLSDACTQDDGSLGPDALIQEIRVKEECVTDEEDCTDNEVASEEKQTETEHVDSDT
QEEHQRTPERGVHDENGTPDAFSQLHTCPHCSRGYKRHTSLKEHIKLRHEKGDDNYCCSL
CSYTFTYRTQLVRHMTAHRHVREQRTISQSGGNRKFKCTECSKAFKYKHHLKEHLRIHSG
EKPYECSNCRKRFSHSGSYSSHISSKKCASVTKAVNGLPRAPGVKTSLTISRPTQILLRE
KVEVTNKPLQEQLPLKQIKQEPVEHQPKPSPATPTIAPTNANGVVAPQGVIQTLVLPTVG
LVQPISINLSDLQNALNAAMDRQALTSGNANGTNAKIIGQSQTQAVVLQPQQGQPQVISA
ISLPVVGQDGNTKIIINYNPQLDPQLKGVKVNTMQPTVTQTGVAQEKSTASNIAQPNVIQ
LNSVQSNLTETQTSGTPKPTQVNIIKPIQSKPPSIIKITPAQAARLVQARAAQPKLTQQT
LLLVRRADGSQSLVVRQIPVANPNTQGTEVKSTPDKTTNTPAAERKETTENPSSLEDNCE
PQNLTAPPEIKIKTEPGSPSNIETDMQSEGEEEETQTDGNNGEGKQTTDAVSHSGTVHSG
VACGDNFHNYATCLVCDSSQSKRKLTDSQDSDDKATTISLNSLLDKDKSGAAERLLPLLK
AYSQNPEPTDGQLAQVAKTVKLPLEAVSKWYQKMRSKKILLQGASNPKNNKEKKTPSAVS
QETNSTQATCTPTQPDDDTSEDTQNESVASPASPAASLSTDDLVIVKTEDIEEDLQSEPL
DLSLPKSSPTQPSTTTKLPVSTQKEPLNLTCLKKQPMPGNTIYVTQGTTGHLNIMTASLP
TLVAIAEPGGVQCIGTAISGNKRTILIPQLTYTYTTNSSIKTPDSVSTDKKGTVILNNCP
QVPDIASDCVSGVEDQNDEDSPLMKKRRKTVGGLYACDLCDKIFQKSSSLLRHKYEHTGK
RPHECAICNKAFKHKHHLIEHTRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKRD
THELPEQISTSTPPSHHDSDERESDAEDEEEEEEEEDLSALDMSDIRVVQVGEEYEDEEE
SGEEEEQDRGHEEEETEEGGMVMEVEIGDTDTLEEEVGETVETEDAMETEESREVSGSAE
DTVLTQNEGNTETAAED
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgccagcgcagaaaacagacacaaccacaacgcaacaacgtg
aggagtttaagcagtgtgccggaggcgacctcagattcagatgatgaagacaaactgcac
attgtggaggaggataatatcgctgacgatcccgaccaaaagtcctcagtattccagctc
aaagcagcgcggcagctctctgacgcatgcacacaggatgatggcagcctggggccagat
gctttaatacaagaaataagggtcaaagaggagtgtgtcactgatgaggaggactgtact
gataatgaagtggccagtgaggaaaagcagacggaaacggagcacgttgactcagacacc
caggaggagcatcagagaacgccagaacgaggggtccacgatgagaacggtacacctgat
gcattctcccaactgcacacctgtcctcactgttcccgcggttacaagcggcatacgtcg
ctgaaggagcacattaaactacggcatgaaaagggcgatgacaactactgctgttccctc
tgtagctacaccttcacttaccgaacgcagctcgtccgtcacatgaccgcacacagacac
gtccgagagcagcggactatttctcagtcgggcggaaacagaaagtttaagtgtacagaa
tgctccaaggccttcaaatacaaacatcacctgaaggagcacttgcgcattcacagcggc
gagaagccatatgaatgctctaattgtcggaagcgtttctctcactctgggtcctacagc
tctcacatcagcagtaagaagtgtgcgagcgtgaccaaagcggtcaacggccttcctcgc
gcacctggagtgaaaacatctcttaccatttctcgccctacacaaatccttttgagggag
aaggtggaagtcaccaacaagcctctgcaagagcagctccccctgaaacagatcaaacag
gagcctgttgaacaccaacccaaaccttcgccagcaacacctacaatagcccccacaaat
gccaacggggtcgtggctccgcaaggcgtcatccaaaccttggtcctgcccactgtcggg
ctggtccagccaatcagcatcaaccttagtgacttacagaatgcgctgaacgctgcgatg
gacaggcaggcgttgactagtggtaatgcaaacggaacaaacgctaaaatcataggccaa
tcgcagacccaagctgtcgtgttgcagccacagcagggacagccccaagtgatctccgcc
atctctctaccggttgtgggacaagacggaaataccaaaattatcatcaactacaacccc
cagctagacccacaactcaagggagtaaaagtgaacacaatgcagcccacagtgacccaa
accggtgtggcgcaagaaaaatctacagcatctaacatcgcacagccaaatgtgatccag
ctaaattcagtgcagtccaacttgaccgaaacccaaacatcaggtacacctaaacctaca
caggtaaacataatcaaaccaatccaaagcaaaccgccatctatcatcaagataacgcca
gcgcaggccgccaggttggtccaagctcgggcggcacaacctaagctcacccagcaaact
ttactactagtgaggagggcagatgggtcgcagagccttgtggttcgacaaatacctgtc
gccaatcccaacacgcagggcacagaggtgaaatcaaccccagacaaaactacaaacaca
ccagcagcagaaagaaaagagacaactgaaaatcccagttcgctggaggataattgtgaa
cctcaaaacctgactgcaccaccagaaatcaaaatcaaaaccgaaccgggctctccgtcc
aacatcgaaaccgatatgcagagtgaaggagaggaagaagagacgcagacagacgggaat
aatggggaagggaaacaaacgactgatgcggtctcccactctggaacggttcacagtggc
gtcgcctgcggagataacttccataactatgcgacatgtctggtttgtgacagctcccag
agtaaacggaagctcacagactcgcaagacagtgacgacaaagctacaactatctctctc
aactctctgctggataaggataagagtggagcagcagaacgcctcctccctcttctgaag
gcctacagtcagaacccagagcctactgacgggcagctggcacaggtggccaagactgtc
aagttacctctagaggcggtcagcaagtggtaccagaagatgcgctcgaaaaagatattg
ctccagggtgcaagcaacccgaaaaacaacaaagaaaaaaaaacaccgtctgctgtgtct
caagaaacaaactcaactcaagccacctgcacgcccactcaacccgatgatgacacctca
gaggacacccaaaatgaaagtgtcgcttcacccgcctcccctgcagccagtctctccacc
gatgatctcgtcattgtaaagacagaagacatagaggaggatctgcagtctgaaccgctc
gacctctcactccccaaatccagcccaactcaacccagcaccaccactaagctgccggtc
tccactcaaaaggagccgctcaacctcacctgcctcaagaagcaaccgatgccaggaaac
accatatatgtgacacaaggcaccacaggtcacttgaacatcatgacagcatcattgcca
acactggttgccatagcagagccagggggtgttcagtgcatcggcactgcaatatccggt
aacaagagaaccatcctgatccctcagctcacctacacctacaccaccaactccagcatc
aagacccctgacagtgtctcgacagacaagaaggggacggtgatactcaacaactgtccg
caggtcccggacatcgcttctgactgcgtgtcaggggtagaggaccagaacgatgaagat
tcacctctcatgaagaagaggaggaagactgtcgggggcctttacgcctgtgatctgtgt
gacaaaatctttcagaagagtagctcactgctgcgacacaagtatgaacacacaggtaag
cgacctcacgagtgcgccatctgtaataaggcgttcaaacacaagcaccacctgatcgag
cacacgcgactacactccggagagaagccctaccagtgtgacaagtgtggcaaacgcttc
tctcactcgggctcttattctcagcacatgaaccaccgatactcttactgcaagagggac
actcatgaactgccagaacagatcagcacctccactcctccctctcaccacgactcggac
gagagagagagcgacgcagaggacgaagaggaagaggaggaggaagaggatttatccgct
ctggacatgagcgatatcagagtggtgcaagtaggagaggaatacgaggatgaggaggag
agcggggaagaggaagagcaggacagaggacatgaggaggaagagacagaagaaggagga
atggttatggaagtggagattggagacactgacactctggaggaggaagtcggggaaacc
gtggaaacggaggatgctatggagacggaggaatcgagggaggtttcaggcagtgcagag
gacacagttctcactcaaaatgaaggaaacacagagacggcagccgaggactga
DBGET
integrated database retrieval system
