Pimephales promelas (fathead minnow): 120495258
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Entry
120495258 CDS
T08155
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04110
Cell cycle
pprm04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120495258 (smc3)
04114 Oocyte meiosis
120495258 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120495258 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pprm00535
]
120495258 (smc3)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120495258 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
120495258 (smc3)
Proteoglycans [BR:
pprm00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
120495258 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
OmpH
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
120495258
NCBI-ProteinID:
XP_039550659
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKMD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKARISAMREEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNAVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKERNLEQYTKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSQNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRIKDTLARSEDLDSLIDKTEVEIKDHQKS
MERWKNIEKEQNEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDTEGGQSQDEGEGGDSERGS
SSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYL
FDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVI
SAEQAKDFVEDDTTHG
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaacaggttattattcaggggtttcgcagctacagagatcagactgtggtt
gaccccttcagctccaaacacaatgtcatagttggaagaaatggatcaggaaagagtaac
ttcttttatgccattcagtttgtgctcagtgatgagttcagtcaccttcgaccagagcag
cgtctggctctgcttcacgaaggcactggtcctcgagtcatttcagcttttgtggaaatt
atattcgacaactctgacaacaggctgccgatcgataaagaggaagtgtctctgcgccgt
gtcatcggagcaaagaaagaccagtacttcttggacaaaaagatggtcactaagaacgac
gtgatgaacctgttggagagtgctggtttctcccgcagcaacccttattacatcgtcaag
cagggaaagatcaatcagatggcgacggcgccggactctcagcgtctgaagctgctcaga
gaggtggcaggcaccagagtctatgatgagcgcaaggaggagagtatctcgctcatgaag
gagacagagggaaagcgagagaagattaatgagctgctgaagtacatcgaggagcgtctg
cacactctggaggatgagaaagaggaactggctcagtaccagaaatgggacaaaatgagg
agagctctggagtacaccatctacaaccaggagctcaacgagacccgggccaagatggat
gagttgtccagtaagagagagacctgtggagacaaatcgagacagctgcgagatgcgcaa
caagatgctcgagacaaagtggaggagacggagcgtgtggtgagggagctgaaggctcga
atctccgccatgagggaggagaaagaacagctgagcgccgagcgacaggagcagatcaaa
cagaggaccaaactggagctcaaagccaaagatctgcaggacgagctggcaggaaacagc
gaacagaggaaacggctgctcaaagagcgccaaaagcttctggagaagattgaagaaaaa
cagaaggagctccaggaaacagaacccaagtttaacgctgtgaaagaaaaagaggagcga
ggaattgcccgactggctcaagccacacaagagcgaacagatctttatgccaagcagggc
cgaggcagccagttcacctctaaagaagagagggacaaatggatcaagaaagagctgaag
tctctggatcaagccatcaacgacaagaaacggcagatcgccgccatccacaaagatctg
gaggacacagaggccaataaagagagaaatctggaacagtacactaaactggaccaagac
ttgaacgaagtgaagactcgagtggaggagttggataagaagtactacgaggtgaagaac
cgaaaggacgaacttcagagtgagagaaattacctgtggagggaggagaacgcagagcag
caggcgctggcagccaaacgagaagacctggagaagaaacaacagctactgagagcagcc
accgggaaggctatcttgaatggtattgacagcatcaataaagtattggagcatttccgc
cggaagggcatcaaccagcacgtcatcaacggttatcacggcatcgtcatgaacaacttt
gagtgcgagcctgccttctacacctgtgtggaggtgaccgctggcaccaggctgttttac
cacattgtggaaacggatgaagtgagcaccaagattctgatggagtttaataagatgaac
ttgcctggagaggtcaccttcctgcctctcagcaaactggacgtcagggacaccgcttac
cctgagactaacgacgcaatccccatgatcagcaagcttcgttacagtcagaacttcgac
aaggccttcaaacatgtgtttgggaagactctgatctgccgcagtatggaagtgtccact
cagctggctcgagctttcaccatggactgcatcactctggagggtgatcaggtgagtcat
cgtggcgctctgaccggcggctactacgacactcggaagtcccgtctggagctgcagaag
gacatgaggaaggccgaggaggagcttggagagctggaggccaaactcaacgagaacctg
cgtagaaacattgaacgtatcaataatgaaattgaccagctgatgaatcagatgcagcaa
atcgagacccagcagaggaagttcaaagcatccagagacagtatactgtctgagatgaag
atgctgaaggagaagagacagcagtcagagaaaacattcatgcccaagcaacgcagtctt
cagagtctggaggccagcctgcacgccatggagagcacgcgggagtctctgaaggcggag
ctggggacggacctgctctctcagctcagtttagaagaccaacgcagagtggacgacctc
aatgacgagatcagacagctgcaacaggacaacagacagctgctgaatgagcgaattaag
ctggagggaatcatgaccagggtggagacgtacctcaacgagaacctgcgcaagcgtctc
gaccaagtcgagcaggaattgaatgaactgagagaaactgaaggaggaaccgtcctcact
gcgacaacgtcagagttggatggcattaataaacgcattaaggacactctggctcgctct
gaggatttggactccctcattgataagacggaggtggaaataaaggatcatcagaagagt
atggagcgctggaagaacattgagaaggagcagaacgaagccatcaaccatgacaccaag
gagctagagaagatgaccaacagacagggcatgctacttaaaaagaaagaggaatgtatg
aagaagatccgcgagctgggctccttgccgcaggaggcctttgagaagtaccaaacgctc
acgctcaaacagttgttcaggaagctggagcagtgcaacacagagctgaaaaagtacagc
catgtaaataaaaaggccttggaccagttcgtcaatttctcagagcagaaagagaagttg
attaagaggcaggaagagctggacagaggatacaaatccatcatggagctcatgaacgtc
ctggagctgcgcaaatacgaggctatccagctcaccttcaaacaggtgtccaagaatttc
agcgaggtgtttcagaagctggttcccgggggtaaagccactctggtgatgaagaagggc
gacactgagggtggacagtctcaggacgagggcgagggaggagacagcgagagggggtcg
tcctctcagagcagtgtgcccagtgtggaccagttcactggcgtgggcatcagggtgtcg
ttcacgggtaaacagggagagatgagagagatgcagcagctctctggagggcagaagtct
ctggtcgctctggctctcatctttgccatccagaaatgtgaccctgctcctttctacctg
tttgatgaaatcgaccaggctctggatgcccagcacagaaaagcagtgtcagacatgatt
gtggagctggctggacatgctcagttcatcactacgaccttcagacctgagcttctggag
tcagcagacaagttctacggcgtcaagttcagaaacaaggtgagtcacatcgatgtgatc
tcagcagagcaggccaaggactttgtggaggacgacaccactcacggctga
DBGET
integrated database retrieval system
