Pimephales promelas (fathead minnow): 120495278
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Entry
120495278 CDS
T08155
Symbol
si:ch211-129c21.1
Name
(RefSeq) semaphorin-4E isoform X1
KO
K06521
semaphorin 4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pprm04090
]
120495278 (si:ch211-129c21.1)
CD molecules [BR:
pprm04090
]
Proteins
120495278 (si:ch211-129c21.1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
Ig_SEMA-3_4_7A
Ig_3
Ig_2
ig
I-set
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
120495278
NCBI-ProteinID:
XP_039550704
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MYYPLFFIILHGCMAGWSNLNSTPRKTIQYEDNHVIMFKEEGIWNYSTMLIREDLGLLVL
GAREAVYALDINDISDAKSKVLWKVTEEKQKECTTKGKHPDIDCHNYVRMLHQMSNGMMY
VCGTNAFSPTCDYITYSDGQLKLEGKLEDGRGKCPFDPFQRSSSVMVDEDLYSATSINFL
GSDPALSRTSPISLRTGLSFNEPSFIYMDMVPESEDSPEGDDDKVYMFFSENAVEYDFFN
KLVVSRVARVCKGDMGGLRTLQRKWTSFSKARLDCAVSEPSLPYVIQDVFHVRNKKWRKS
VFYAVFTSQSSSTDQSSAVCAFNVTDISEVFSHGKFKTEVTVEMSDVKWVTYNGELPVPR
PGACINNAARRLGIKRSLDLPDKTLQFIRDRPLMDDAVRPITGKPLLLKRGPLMTRLVVD
VVTALDGQTYPVMFVGTENGYVQKAVNYDGEIHIIEEVQLFQNTEPIDILRLYQNQLYAG
SASGVVQMLVSNCSRYSSCLDCVLARDPYCAWDVTALWCSRLPTSPEDAKGNLIQSLKDG
DATRCPTTATGEPKIRTLVLGNNIKLLCRAESNLAQVKWNFAGKPLPYSNKKYTIYSDGI
LIYNASANDAGLYTCMSVKWAKGRQYSQTLAIYDLRERLPVDVTDKIKATLEILTESHTT
SSGLHEIEEPPIAINQSSESKWVVMQVSLAVISVMMACLLIWNLYMGHISPFMCCGRQPI
KSPRNLPGKEYMHTGNDAVDSKQTMVRLCVTTNSNTEATSFHRNNSNGDTSTDIHIFKYI
TDESEI
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtattatcctctgttcttcatcattctgcatggctgcatggctggatggagcaatctg
aatagcaccccccgaaaaaccattcaatatgaagataaccatgtgatcatgtttaaagag
gaaggtatctggaattactccacaatgctgattagggaggatctgggtttgctggtgttg
ggggcgagggaggccgtctacgcccttgacataaacgatatctccgatgccaagtctaag
gtgctttggaaagttacagaagagaaacaaaaggagtgcaccactaaaggaaaacatcct
gacatcgactgtcataattatgtacggatgctgcatcaaatgagcaacggcatgatgtac
gtgtgcggaacaaacgcctttagcccaacctgtgattacataacatacagtgacgggcag
ctgaagctggagggaaagctggaagacgggagggggaaatgtcctttcgatccgttccag
agatcctcttctgttatggttgatgaagacctgtattctgccacgtccattaactttctg
ggttcggacccagccctatcccgcacatctcccatttcactgcgcacagggttaagcttc
aatgagccaagcttcatctacatggacatggtcccagaaagtgaggacagtcctgagggc
gacgatgacaaagtctacatgttcttcagtgagaacgccgtggagtacgacttcttcaac
aagcttgtggtttcgcgggtcgccagagtctgcaagggtgatatgggtggtctaaggacc
ctccaaaggaaatggacctccttctcgaaggctcgtctggactgcgcggtctctgagccc
agtctgccctacgtcatacaggacgtcttccatgttcgcaacaagaaatggaggaaaagt
gtattttacgctgtcttcacctctcaatcgagctcaacagatcagtcttcagcggtatgt
gcatttaatgtaaccgatatcagcgaggtgttctctcacggcaaatttaagactgaggtg
accgtggaaatgtctgatgtgaagtgggtcacatacaacggagagcttcctgtcccccga
ccaggagcttgcatcaacaacgcagcgagacgtttgggaattaaaaggtcgctggacctc
cctgataaaaccctgcagttcatccgagaccggcctctcatggacgacgcagtccgtcca
atcacaggcaagcccctgctgctcaagagaggcccgttgatgacccgtcttgtggtagac
gtcgtaactgcattggacggacagacctatcctgtgatgtttgtcggcactgaaaatggt
tatgtgcagaaagcagtgaactatgatggagaaatacacatcattgaagaagttcaattg
tttcagaacactgagccgattgacatcctacgactttaccagaatcagttgtacgcaggc
tctgcgtctggggttgtacaaatgctcgtcagcaactgcagtcgttattcttcctgtctg
gactgtgtgctggctagagacccttactgtgcctgggatgtcactgctctgtggtgctct
agattacccacatcacctgaggacgcaaaaggtaatctgatacaaagcctgaaagacggg
gatgccactcgatgcccaacaacagctaccggggaaccaaagatccgcaccctggtgctg
ggaaacaacatcaagttgctgtgtcgagcagagtctaacctggcccaggtcaagtggaac
tttgctggaaagccactcccctactcaaacaagaagtacactatttacagtgatggcatc
ctcatctacaatgcttcagccaatgatgctggactctatacctgcatgtcagtcaagtgg
gcaaaagggagacagtacagccaaacacttgccatttatgacttacgtgaacgcttacca
gtcgatgtgacggacaagattaaggctacattggaaatacttactgaaagccacacaacc
tcatcaggtttgcatgaaatcgaagagccacctattgctattaatcagagcagtgagagt
aaatgggttgtaatgcaagtgtcgctggccgtgatatccgtcatgatggcctgtttgctg
atctggaacttgtacatgggccacatctctccatttatgtgctgtgggagacagccaatc
aaaagccccaggaatcttccaggaaaggaatacatgcacacgggaaatgatgccgtagac
agtaaacagacaatggtcaggttgtgcgtcacaacaaacagtaatactgaagcaaccagc
ttccacaggaataacagcaatggggatacgtcaacagacattcatatttttaagtacatt
acggatgagtctgagatttaa
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