Pimephales promelas (fathead minnow): 120495425
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Entry
120495425 CDS
T08155
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120495425 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120495425 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
pprm04131
]
120495425 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
pprm03029
]
120495425 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120495425 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120495425 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
120495425 (si:dkey-110c1.10)
Membrane trafficking [BR:
pprm04131
]
Others
Actin-binding proteins
Myosins
120495425 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
pprm03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120495425 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120495425 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
HTH_17
AAA_22
Myosin_N
AAA_16
DUF386
Motif
Other DBs
NCBI-GeneID:
120495425
NCBI-ProteinID:
XP_039550927
LinkDB
All DBs
Position
Unknown
AA seq
1653 aa
AA seq
DB search
MATTELYTKGACVWVPDPEAVWVSVQLLQDYRPGDQQILIQLSDGREMEYPVLPPAGLPP
LGNPDILEGENDLTALTFLHEPAVLHNLRVRFLDYNSIYTYCGIVLVALNPYEQLPIYGE
EVIDAYSGQDTADMEPHIFSVAEEAYCTMTREEKNQSIIISGESGSGKTVSAKYTMRYFA
VVGGAAQQTSVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFGWKGDIIGANMKT
YLLEKSRVVFQAAEERNYHIFYQLCASRDLPELRTLKLDSAENFHYTNQGQDVHIPGTND
VVELERTRNAFTILGVQPDQQMEIFRILAAILHLGNVNIQASGRGGDRSYINADDHSLAV
FAKLLGVEGAQMAQWLCHRRLAVGGEMLVKPMTGQQANEARDALAKHVYEQLFTWTVQRL
NSSLRAHREQPKSFIGVLDIYGFETFDRNSFEQFCINYANEKLQQQFNRHVFQLEQEEYL
REELPWNRIEFSDNQPCIALIEGQLGLLDLLDEECRMPKGSDENWARKVYDQHLNHSPYF
RKPRMSNSAFVIVHFADLVQYECDGFLDKNRDTVCEEPINILRASQSELVAELFQKESGG
SLPNSSLANGSVRSGKRAHREHKLTVGFQFRQSLQLLMDTLNSTTPHYVRCIKSNDLKQP
FLFDPKRAVQQLRACGVLETIRISAAGYPSRWTYEEFFTRYRVLLHDSVSQDDVRRSCQS
ALPNLIPDPEQYCFGKTKVFFRAGQVAVLEKLRGDRLSRAGVLIQSWVRGWLQRRRYQRL
RWATFILQRYTRGTLARRLAWTLRYTRVALIIQKTYRMLAVRQLYMTIREATIKIQAFIR
GTQARRIYRQMLTERAVVFLQAQVRGWLARCSFRRVRTAVVLLQSCVRRRVARKELLRLR
AEARSVEKFRELNKGMEVKLMQLQLRADQQARESASLREILQSERASHSSELEQLRSSLL
KLKIQLQENANTAPLLADKQEEDIRKAGEKAAQEILQLTQEIQALRFERDSLEKEKDDLA
VRLQDQEKAQEESRQQSVDQAGASVQAELEEERRRYQSLLREFTRLEQRYDNLRDMSLFT
TNEHSRGHRRTDSTVSLEPLSPVTTPFSSSPIFPSPEEIRKISVTSATDRRPWSYEQPLN
ILMEDMNVAKDTAEGMKGEDLRYAYDAVRVANKFLETQLLSQRGQWEQEISALRMKLQQA
HDRDTPGDPEINELTEQVVVREQECVRLRRELKELKHTVSLRRILSYAGVAIAASQDPTS
PGPQKSQTLSGLLECRKRDESKLIKHLITDVKAEGVLSLSPGLAARVLFLCVRQADCSGD
QTRVKGLCGAAVSAIKTAMKKHGNDLDMTAVWLKNAYLLKDLLHQHSHQQDVRGCEELVP
LVTDVQECVRALSDVCIQAYQQLLSISESHLQPMIVPAMLESETIPGLAVSSLKSVGRKR
AGSDPRPPTSTEGTTMSAVLRELSALHTALSHQDLPSALLAQAFRQLMYLLSATTLNSLL
LRKDMCCWNRGLQIRYNVSLLEEWLRSRSLQAGGTVSALEPLIQAAQLLQMSKKTEADGQ
AMVQTCNALSNQQLVKMLSLYTPQSDLEERVTLNFIRIVQGLLKGRSEGQPPQLLMDVRR
VFPVTFPYQPPPQVTAAQLEIPESLKISFLRRV
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccacagagctctacacaaagggtgcatgtgtgtgggtgccagacccagaagct
gtgtgggtgtctgtacagctgcttcaagactatcgtcctggagaccagcagatcttaatc
caactcagtgatggcagagagatggagtatccagtgttgcctccggcaggtcttccccct
ctaggtaaccctgatattttggagggggagaatgacctcacagctctaaccttcctccat
gagccagcggtacttcacaatttgcgagtgcgctttcttgactacaatagcatttacaca
tattgcgggattgtgttggtggcattaaatccatacgaacagttgcccatctacggagag
gaggtgattgatgcttacagtggccaggacacggctgatatggagccgcatattttttcg
gtggctgaagaggcgtattgcactatgaccagagaggagaaaaaccagtccatcataatc
agtggagaatcaggttcaggtaaaactgtatctgccaagtacaccatgcgttactttgct
gttgtgggtggtgcggcccagcagaccagtgtggaggagaaagttttggcgtccaatccc
atcatggaggcaattggtaatgcaaaaacaactagaaacgacaacagcagccgttttgga
aagtatattgagataggatttggatggaaaggggatataattggggcaaacatgaagacc
tacttgttggagaaatcaagagttgtttttcaggcagctgaggagagaaactaccacatc
ttctaccagctttgtgcttccagggatttgccagagttgaggacactcaaattggattct
gcggagaacttccattacaccaaccaaggacaagatgtgcacattccaggcacaaatgat
gttgtcgagctggagcgtacaagaaatgcctttactatacttggagtgcagccagaccag
cagatggagatatttcgtatactggcagctattcttcatctggggaatgtcaacatacaa
gccagtggtcgtggtggggaccgaagctacattaatgccgatgaccactctttggctgtc
tttgccaagcttttgggggtggaaggtgctcagatggcccaatggctatgtcacaggcga
ctggcggtgggtggggagatgcttgtgaagcccatgacaggccagcaggctaatgaagca
cgggatgctctggctaagcatgtgtacgagcaactattcacatggacggtgcagagactc
aactcatccttacgagcacaccgggaacagcccaaatctttcataggagttcttgatatc
tatgggtttgagacttttgacaggaatagctttgagcaattctgtattaactatgccaac
gagaaactccaacaacagttcaacaggcatgtgtttcagttggagcaagaggagtacctg
cgagaggaacttccctggaatcgtattgagttcagcgataaccagccatgcattgcactc
attgaaggccagctgggcctacttgatcttctggatgaggaatgcagaatgccgaaaggc
tcggatgagaactgggctcggaaggtttacgaccagcacctgaaccacagcccctacttt
cgtaaaccccgcatgtccaactctgccttcgtcattgtgcattttgctgatttggttcag
tacgagtgtgatggctttttagacaagaaccgagacactgtgtgtgaggagcccatcaat
atactgagagctagccagtcagaactagttgcagagttgttccagaaggagtcaggggga
tccctccccaactcctctcttgcaaacgggagcgtacgttcaggaaagcgagctcacaga
gagcacaaattaactgtgggttttcagtttcgtcaatccctgcaacttttaatggacacc
ctgaacagcaccactccccattatgtccgctgcataaagtccaatgacctcaaacagcct
tttctatttgatcccaagcgagcagtgcagcaattgcgagcgtgtggagtcttggagacc
atccgaatcagtgccgcaggctacccctccaggtggacgtacgaggagttcttcacccgc
taccgggtgttgctacatgattctgtttctcaggatgatgtacggcgttcctgtcagagt
gccctgcccaacctcatccctgatccggagcagtactgctttggcaagaccaaggtcttc
ttccgggctggacaagttgcagtactggagaagctgagaggggatcggctatctagagca
ggggttttgatccaaagttgggtgagaggctggctgcagcgtaggcgttatcagcggctc
cggtgggccaccttcatcctgcagcgctacaccagaggaaccctagcccgaaggttggcg
tggaccctccgttatacacgcgttgctttaatcatccagaaaacttaccgcatgctggct
gtgcgacaactttatatgaccatcagagaggccaccatcaaaatccaggccttcatcaga
ggcacccaggctcgtcgcatttatagacagatgctgacagagcgggcggtggtgtttttg
caggcacaggtgcgaggctggctggcccggtgcagtttcaggcgcgtcagaactgcagtc
gtgcttctgcagagttgcgtgcgcagacgagttgcacgtaaagagctgttgcgcctgcgt
gctgaggctcgatcggtagagaaattcagagaactcaataagggcatggaagtcaaactc
atgcagctgcagctcagagctgaccaacaggcgagagagagtgcgtctctgagggagatt
cttcagtccgagcgagcatctcacagctctgagctggaacagctgcggtcaagcctcctc
aaactcaagattcaactgcaggagaatgcaaacactgctcctttacttgcagacaaacag
gaggaggacataaggaaagctggggagaaggccgcccaagagattctccagcttacacag
gaaatccaagctctccgattcgagagagattctttggagaaagagaaggatgacttggct
gttcgtttacaggatcaggaaaaggctcaggaggagagccggcagcagtctgtggatcag
gcgggtgcatcagtgcaagcagagctggaagaggagaggaggagataccagagtttactt
agagagttcacgaggctagagcaaagatatgacaacctaagagatatgagcctattcacc
accaatgagcattcacgtggacataggcgaacagattcgactgtgtctttggagcctctt
tcgcccgtcaccacgccgttctcgagctcgcccatcttcccttcacccgaggagatcagg
aagatcagcgtcacgtccgccaccgacaggagaccctggagctatgagcaacctctgaac
atcctaatggaggatatgaacgttgcgaaggacacagccgaggggatgaagggggaagat
ctcagatatgcgtacgatgctgtacgggtggccaacaagtttctagagacgcagctgttg
tctcagagagggcagtgggagcaggagatttcagctctcaggatgaaactccagcaggcc
catgacagagatacgcctggagatcctgagataaatgaactaacggagcaggtggtggtt
cgagaacaggaatgtgtccgattacgtcgagagctcaaggaactgaagcacactgtgagc
ctcaggagaatcctttcttatgcaggtgtagcgatagctgcgtctcaggacccaacatct
cctggccctcagaagagccagacactcagcggactactggagtgcaggaagagagatgag
agcaagctgatcaaacatcttataacagatgtgaaggcggagggagttttgtctttgtcc
cctggactggcggcccgggttctgtttctgtgtgtacggcaagcggactgtagtggcgat
cagacgcgagtgaaggggctctgtggcgctgctgttagcgctattaaaactgccatgaag
aaacacggtaatgatctggatatgacggcggtgtggctaaagaacgcttacctgctcaaa
gacctgctccaccagcactctcaccaacaggatgtgaggggctgcgaggagctggtgcct
ctggtgacggacgtgcaggagtgtgttcgagcgctcagtgatgtgtgtattcaggcctat
cagcagctgctgtccatctctgagagccatctacaacctatgatcgtcccagcaatgctt
gaaagtgagaccatccctggtctggcagtttcatctttaaagagtgtgggccgcaagcga
gcgggttcggacccccggcctcccaccagcacagaggggaccactatgtctgcagtgttg
agggaactgtcagcattacacacagccctgtcccatcaagatctgccctcggccctgctg
gcacaagccttccgtcagctcatgtacctgctgtccgccaccaccctcaacagcctgcta
ctgcgcaaagacatgtgctgctggaaccgcggcctccagatcaggtataatgtgagttta
ctggaggagtggctgcggagtcgttcgctgcaggcagggggcactgtgagcgctctggag
cctctgatacaggcagcacagcttcttcaaatgagcaagaagactgaagcggatggacaa
gccatggtccaaacctgcaatgcattgtccaaccagcagcttgtgaagatgttaagcctc
tacacacctcagagtgacctcgaagagagagtaacgctcaatttcatccgtatagtacag
gggctgctgaaggggcgctctgaggggcaacctccacagcttctgatggatgtcagacgg
gtgttccccgtcacgttcccttatcagccgcctccgcaagtcactgccgcccagctcgaa
atcccagagtccctcaagatctccttcctacgcagagtttga
DBGET
integrated database retrieval system
