Pimephales promelas (fathead minnow): 120495469
Help
Entry
120495469 CDS
T08155
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
pprm
Pimephales promelas (fathead minnow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_13
LRR_9
LRR_5
LRR_At5g56370
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
120495469
NCBI-ProteinID:
XP_039551008
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MSSTLGKDKDSKEREPKAEGKSKTKGKDAKDGKKDTSGTSPAVAFAVDSTIKRPNPPPST
RKKSSNAEVIKELNKCREENSMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPSE
LGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVTSLTTLYLRF
NRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT
QITNLDLQHNDLLDLPETIGNLSSINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISV
LPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVL
SKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEVLILSNNLLKKLP
HGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGL
GENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIV
AGGPSFIIQFLKMQGPYRAMV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtactctgggcaaagataaagactctaaggagagggaacccaaagctgaaggg
aaatccaaaaccaaagggaaagatgccaaagacgggaagaaagacacgagcggcacttcg
cccgcggtggccttcgcggtggacagcacgataaagcggcccaacccgccgcctagcacg
cgcaaaaaatccagcaacgcggaggtcataaaggagctgaacaagtgccgtgaggagaac
tcgatgcgcctggacctgtccaagagatccatccatctcttgccctcttccattaaggag
ctgacccagctgaccgagctctacctgtacagcaacaagctgcaaagtctgccgtccgag
ttgggatgcctgtcaggactggtgacgctggcgctcagcgagaactctctcaccagcctg
cccgactcgctggacaacctgaagaagttgcgtatgctcgacctgcggcataacaagctg
cgggagatcccggccgtggtgtaccgcgtcacctccctcaccacgctctacctgcgcttt
aaccggatcaccaccgtggagaaggacatcaagaatctgtccaaactcaccatgctcagc
atccgagagaacaagattaaacagctgcccgcggagatcggtgagctctgtaacttgatt
acgctggatgtagcccacaaccagttggagcaccttcctaaagagatcggcaattgcact
cagatcaccaaccttgacctgcagcacaatgatcttcttgacctacctgagactataggt
aatttatcgagtataaaccgtctgggtctgagatacaaccgcctatcagcaatccctcga
tctttagcgaagtgccgcgagctggaagagctcaaccttgagaacaacaacatctcagtg
ttaccagaggggcttctgtccagtctggtgaacctgacgagtctgacgttggcgcggaac
tgtttccagtcttacccagtgggcggcccgtcgcagttctccaccatctactcgctcaac
atggagcacaaccgtatcaacaagatccccttcggcatcttctcccgagccaaagtgctc
agcaagctcaatatgaaggacaaccagttaacatctcttccactggattttgggacgtgg
accagtatggtggagctgaacctggcaacaaaccagcttacaaagattccagaggatatc
tgcggacttgtgtctttagaggtcctcatattgtccaacaatctcttgaagaagttgcct
catgggattgggaacttgcggaaactacgagagcttgacctggaggagaacaaactggag
tccctcccgaacgagattgcctaccttaaggatctgcagaaacttgtgttgaccaataac
cagctgaccactttgccgagaggaatcggtcacctgaccaacctgacgtacctgggcttg
ggagagaatctactgcagcacctacccgaggagatcggcacactggagaacctggaggac
ctgtacctgaacgacaaccctaacctgcacagtctgccgttcgagctggccctgtgcagc
aagctgtccatcatgagcatcgagaactgccccctcagccacctcccaccgcagatcgtc
gccggaggcccttccttcatcatccagttcctcaagatgcagggtccctaccgggccatg
gtctga
DBGET
integrated database retrieval system
