Pimephales promelas (fathead minnow): 120495550
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Entry
120495550 CDS
T08155
Symbol
lrrc29
Name
(RefSeq) F-box/LRR-repeat protein 16 isoform X1
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120495550 (lrrc29)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120495550 (lrrc29)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_Zer-1
F-box_5
F-box
Motif
Other DBs
NCBI-GeneID:
120495550
NCBI-ProteinID:
XP_039551117
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MFQRECCNLYIFSLLLQIISYILSYLHVTDRKEASLVCKSWYEASQDHRFQKNATFKFHV
STSSLDFIRALARRPRCGLVISHLDGSSLSRQVLLEVGLHLGPHLDSLALPGSSITESSL
LGLLPHLTGLRKLDLHGLDSLFMSGAFLSRQEHRRQVEDALRNLEELDLSDLRYLSDLSF
NRLTSCTPRLRGLALAGCHIAFEFDPYRGSPVGSGSSALVSLRNLLTLLQKQACTLHSLD
LSRTSITPESLRSIAQVPGLRLEDLSLRGCKELTDYSIETLCKHQNGLRTLDLGACTELT
SRTVLAVSTELKDLQSLTLSQDWKITDKGLTELMALPCLRTLDLSECLHVSGTDLVKGLS
CPQPRAQLQSLSLRNCSYIRDPVMFSLTQLLGSNLRKLDLTSCVYLTDLSVHAIANYLPA
LLVLRLGWCKEISDWGLLGMVEPTKNCEPRDKEDDKGPSFTRTFGNMGFFQPPSMPFQEK
PRLVTDEDLGAFRDREGASLLALRGLQELDLSACSKLTDTSITQVLRFPDLQRLSLSMLP
EISDDSLVSVALHCRNLTSLALNLCPQISDQGMARALPLLHRLQHLFLACCDAVTNDTLS
IIALHCDRLRTLDVSMCKDITVHQVDLLQSRLPFLEKVQCRFANGTDFTIVL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgttccagagagagtgttgtaacctgtacattttctcccttctgctccagattatctcc
tacatattgagttaccttcatgtaacggatcgaaaggaggcgtcactggtctgtaagagt
tggtacgaagcaagccaagaccaccggtttcagaaaaatgccaccttcaagttccatgtt
tccacatcttcactggactttatccgtgcacttgcaaggcgccctcgctgtggcctagtc
atcagtcatcttgatggatccagcctgtcaagacaagtacttttggaagtggggcttcac
ctaggccctcacttggacagtttggctctaccgggcagcagcatcacagagtcttccctg
ctgggcctcctgccacatctgaccggcctccgcaagctggaccttcacgggctggacagc
ctcttcatgtctggggcttttctgtcaagacaggagcaccgtcgacaggtggaggatgct
ttgaggaacctggaggaactggacttgtctgatctccgctacctctccgatctctctttc
aaccggctgacgagttgcacgcccaggttgcgcggtctggccctggccgggtgccacatc
gctttcgagtttgacccataccgaggtagccctgttgggtccggctcctcggctctagtt
tccctccggaacctcctgactctcttgcagaagcaggcctgtacgctccacagcctggac
ttgagtcgcaccagcatcacccccgaatccctccgctccatagctcaggtgcccggcctc
cgtctggaggatctgagtctacgcggctgtaaagagctgactgactactccatagaaacc
ctctgcaagcaccagaacggcctgaggacgctggatctcggtgcctgcactgagttgacc
agtaggacggtgctggcggtgtccactgagctgaaggatctgcagtcgctgaccctctcg
caggactggaagataacagataaaggcctgaccgagctgatggcgctgccgtgcttgagg
actttggatctgtcggagtgtctgcatgtcagcgggacagacctggtgaagggattgtcc
tgtccacagcccagggcgcagctgcagtcccttagcctaagaaactgctcatacataagg
gacccagtcatgttctccctgacgcagttgctgggcagtaacctgagaaagctggacctc
acctcctgcgtctacctcaccgacctcagtgttcacgccatcgcaaactatctccctgcg
ctgctggtgctgcggctcggctggtgcaaagagatctcagactgggggctgctggggatg
gtggagcccaccaaaaattgtgaaccaagagacaaagaggatgataaaggcccaagcttt
accaggacatttggaaacatgggctttttccagcctcccagcatgcctttccaggagaag
ccacgtctcgtaaccgatgaggacctgggggcgtttagagatcgggaaggagcatcactg
ctggccctcaggggtcttcaggaactggacctgtcggcctgctcgaagttaaccgacacc
agtatcacacaggtactccgtttcccagacctgcagcgtctctcgctttccatgctgccc
gagatcagcgacgacagcttggtgtccgtagctcttcactgccgcaacctcacgagcctg
gcactcaacctctgtccccagatcagtgaccaaggtatggcgcgggcccttccgctcctc
cacagactgcagcatctattcctggcctgctgcgacgcggttacaaacgacactctttcc
ataattgcgctgcactgtgacagactcaggaccctcgatgtgtccatgtgcaaggacata
actgtgcaccaggtggacctcctccagtcccgcttgcccttccttgagaaagtccagtgt
cgctttgccaatggcacagatttcactattgtactctga
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