Pimephales promelas (fathead minnow): 120495576
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Entry
120495576 CDS
T08155
Symbol
pou2f1a
Name
(RefSeq) POU domain, class 2, transcription factor 1a isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120495576 (pou2f1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120495576 (pou2f1a)
03021 Transcription machinery [BR:
pprm03021
]
120495576 (pou2f1a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120495576 (pou2f1a)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
120495576 (pou2f1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
POU2F1_C
Homeodomain
Ribosomal_S8e
DUF2857
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120495576
NCBI-ProteinID:
XP_039551139
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MADRGSTTQDDRSTADSSPADLSHSAMESRGLPAAPAEGPDTHTPDTHTTETHTPDTQTP
SAPAASAVSNAQAQALIQQVFLQQAQLMAAAGHQSSSSGASISASAATPITLAPPIQIAS
GLAPQGLNLQQFVLVPSGHSISPQIQPQFIISPSPQGQTGLLQAQNILTQLPQSQASLVP
TQTSLTLTTQAATPTRKIAAMPSPACPGPKRVDGPCVEEAGDLEELEQFAKSFKQRRIKL
GFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLTDAENMSADCVV
SSASEMSPGLCESLNRRRKKRTSIETTIRLALERSFLEQSQKPSSEEITLIADQLNMEKE
VVRVWFCNRRQKEKRINPPSSCSGSPSAIKAIYSSANTVSSTNTLTVNSVVPLNASNISN
FTLSGGALAQVTSHTPSVISMAPVATPVTSSSLSPSVTSVKQEAVSTATTQGAGQFLVTG
TGYNPTFITPSQLTQGGTLLSFSPALGNTLMNNNTLATIQAALASGGALPLTSFDGNTGL
LFANTSAGSPAPGLMTTPFFLNPSGLSLLPANLLSGGGAGGGALNLHVTSDVQQSPVAMT
TKSVALASKAQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagaggatcaacgactcaagatgatcgctcgactgcagattccagcccagca
gatctgagtcacagcgccatggagagccgaggacttccagcagctccagccgagggtccc
gacacacacacgccggacacacacacgacggaaacacacacgccggacacacagacgccg
agcgcaccggcagcgagtgccgtcagcaacgcccaggcgcaggcgctgatccagcaggtg
ttcctgcagcaggctcagctcatggcagctgctggtcatcagagcagttccagtggagcc
agtatctccgcctctgcagccacgcccatcactctggccccgcccattcagatcgcctca
ggtttggctcctcagggcctgaacctgcagcagtttgtgttggttccgtcgggtcactcc
atcagtcctcagatccagcctcagttcatcatctctccgtctcctcagggtcagactggt
ctcctgcaagctcagaatattctgactcaactacctcaaagccaagcgagcctcgtgccg
acccagaccagcctcacactcaccacacaggcggcgaccccgacgaggaagattgcggcg
atgccgtctccggcgtgtcccggcccgaagcgtgtggacggcccgtgtgtggaggaggcc
ggcgacctcgaggagctcgagcagttcgccaagagcttcaagcagaggcgtatcaagctg
ggcttcactcagggggacgtggggctggcgatggggaagctctacggaaacgacttcagc
cagaccaccatctccagattcgaggccttgaacctgagcttcaagaacatgtgcaagctc
aaacccctgctggagaagtggctgaccgacgccgagaacatgtccgccgactgcgtggtg
tcgagtgcgagcgagatgtctccgggtctctgcgagagtctgaaccggcgccgcaagaag
cggaccagcatcgagaccaccatacgcctggccttagagaggagctttctggagcagagc
cagaagccgtcgtcagaggagatcacactgatcgcagatcagctcaacatggagaaggag
gtggtgcgagtctggttctgtaaccgcagacagaaggagaagcggatcaatcctcccagc
agctgtagcgggtcaccatcagccatcaaagccatctacagcagcgccaacactgtgtcc
agcacgaacacgctaacagtgaattctgttgttccgctgaacgccagcaacatctccaac
ttcacgctcagcggtggtgctctggctcaggtgacgtcgcacacaccctcggtcatctcc
atggcgcccgtcgctacgcccgtgacatcgtcgtcattgagcccgtccgtcaccagtgtg
aaacaggaggcagtctccacggcaaccacgcagggggcggggcagttcctggtgacgggc
acaggatataacccgacgttcataacgccctcgcagctgacgcaaggtgggacgctgttg
agtttttctcctgctctgggaaacacactgatgaacaacaacacactggccaccatccag
gcagctcttgcgtcgggcggcgctcttcctttgacgtccttcgacggaaacactggcctc
ctattcgccaacaccagtgcaggaagccccgcccccggtctgatgaccacgcccttcttc
ctcaacccctccggcttgtctctgctgccagccaatctcctgtcggggggcggggcagga
ggcggagctctcaacctgcatgtgaccagtgacgtgcagcagagtccggttgccatgacg
acgaagagcgtggccttggcctcgaaggcccagtga
DBGET
integrated database retrieval system
