Pseudomonas protegens Cab57: PPC_0137
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Entry
PPC_0137 CDS
T03613
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPC_0137
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_0137
02044 Secretion system [BR:
ppro02044
]
PPC_0137
Transporters [BR:
ppro02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PPC_0137
Secretion system [BR:
ppro02044
]
Type I secretion system
Adhesin protein transporter
PPC_0137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
MMR_HSR1
DUF87
AAA_29
AAA_33
DUF4396
RsgA_GTPase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAO59484
LinkDB
All DBs
Position
156730..158883
Genome browser
AA seq
717 aa
AA seq
DB search
MESEVSVQLSHDPRGMHDDPLLDGLLTLCFLHQKPASAAMLTTGLPLPSQRLSAELLPRA
AARAGLQGRVLRRKLEQIPAIAMPALLLLKDGRSAVLLGWQGEDQARLLLSESDGGEVCV
DRQLLADDYSGQVFFAQPQHKFDVNHGSLIPRARSWFRDTLKRSRWLYADAIAASLLINI
IAMAAPLFVMNVYDRVVPNQATSTLWVLSIGIIGAYIFDLILKGLRSLCLDLAGKKTDLI
ISATLFERIVGMAMKYRPARVGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTLLIFLVIA
ILGGHLVWIPVLAFPIALCIGYALQKPLVATMEKTMALGAERQSSLIETLAGLDAVKVNN
AESERQYQWEQTIGTLSRLELRVKMLSSLAMNITLLIQQLAGVIMIIFGVYQIIDGNLSM
GGLIACYMLSGRALSPLASLSGLLTRYQQARVTMTSVDQMMELPQERNFDERPLSRSVLQ
GAIECRQLSFTYPGQQNPALKNINLMIKPGEKVGIIGRSGSGKSSLAKLLVGLYQPDSGA
LLVDGVDIRQIDVSELRHNIGYVPQDIQLLAGTLRDNLTSGARYVEDELVLQAAELAGVH
EFARLHPQGYELQVGERGQNLSGGQRQNVALARALLLNPQILLLDEPTSAMDNTGEERLK
QRLEAVVQSKTVVLVTHRASLLSLVDRLLVVDRGQILADGPKAVVMEALKKGQISVA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
gtggaatcagaagtcagtgtgcaactcagtcatgatccacgcggcatgcatgacgatccc
cttctggatggtttgctgaccctctgcttcctgcaccagaagcccgccagtgcggcgatg
ctgaccaccggcctgcccttgccatcccagcgcctgagcgccgagctgctcccccgggcc
gcggcccgggccgggctgcagggccgggtgctgcggcgcaagctcgaacagattccagcc
atcgccatgcccgccctgttgctgctcaaggacggtcgcagcgcggtgctgctgggctgg
cagggtgaagaccaggcgcggctgctgctcagcgaaagcgatggcggcgaagtctgtgtc
gaccgccagttgctggccgacgattacagtggccaggtgttcttcgcccagccccagcac
aagttcgacgtcaaccacgggtcgctgatcccccgcgcccgttcctggttccgcgacacc
ctcaagcgctcgcgctggctgtatgccgacgccattgccgcgagcctgctgatcaacatc
atcgccatggccgcgccattgttcgtgatgaacgtctatgaccgggtggtgcccaaccag
gccacctcgaccctgtgggtgctgtccatcggcatcatcggcgcctacatcttcgacctg
atcctcaagggcctgcgcagcctgtgcctggacctggcgggaaagaagaccgacctgatc
atttccgccacgctgttcgagcgcatcgtcggcatggccatgaagtaccgtccggcacgg
gtcggcagcttcgcccagaacatccatgagtttcagagcctgcgggacttcctcgcatcc
ctgaccctcaccagcctgatcgacctgccgttcaccctgctgatcttcctggtgatcgcc
atccttggcgggcatctggtgtggattccggtgctggccttcccgattgccctgtgcatc
ggctatgccctgcagaagccgctggtggcgaccatggagaagaccatggccctgggggcc
gagcgccagtcgagcctgatcgagaccctggccggcctggacgcggtcaaggtcaacaac
gccgagagcgagcgccagtaccagtgggagcagaccatcggtaccctcagccggcttgag
ctgcgggtgaagatgctgtccagcctggcaatgaacatcaccttgctgatccagcaactg
gccggggtgatcatgatcatcttcggcgtgtaccagatcatcgacggcaacctcagcatg
ggcggcctgatcgcctgctacatgctcagcggtcgggccctgagcccgctggcttcgctg
tccgggctgctgacccgctaccagcaggcgcgggtcaccatgacctccgtggaccagatg
atggagctgccccaagagcgcaatttcgacgagcgccccctgagccgcagcgtgctgcag
ggtgccatcgagtgccggcaactgagctttacctacccggggcagcagaacccggcgctg
aagaacatcaacctgatgatcaagccgggtgaaaaggtcggcatcatcggccgcagcggc
tccggcaagagctccctggccaagctgctggtggggctctaccagccggactccggggcc
ctgctggtggacggtgtggatatccgccagatcgatgtcagcgaactgcgtcacaacatc
ggctacgtgccccaggacatccaactgctggccgggaccctgcgtgacaacctgacttcc
ggtgcccgctacgtcgaggacgaactggtgctgcaggccgcggaactggcgggggtccat
gagttcgccaggctgcacccgcagggctatgaattgcaggtgggcgagcgcgggcagaac
ctttccggtggccagcggcagaacgtcgccctggctcgcgcgctgttgctcaacccacag
atcctgctgctcgacgagcccaccagcgccatggacaacaccggcgaagagcgcttgaaa
cagcgcctggaggcggtggtgcagagcaagaccgtggtactggtcacccaccgggcgtcg
ttgctgtcgctggtggaccggctgttggtggtggaccgtggacaaatcctggccgatggc
ccgaaagcggtggtgatggaagcgttgaagaaggggcagatcagtgttgcttaa
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