Pseudomonas protegens Cab57: PPC_0166
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Entry
PPC_0166 CDS
T03613
Symbol
pgaB
Name
(GenBank) outer membrane N-deacetylase
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
ppro
Pseudomonas protegens Cab57
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Gene cluster
GFIT
Motif
Pfam:
GHL13
Polysacc_deac_1
GHL10
Motif
Other DBs
NCBI-ProteinID:
BAO59513
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All DBs
Position
191457..193454
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AA seq
665 aa
AA seq
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MRLINRCILLLGALVLSACSQPAADFLAPAQRPLPNTEAPWPKNHVLGIAYHDIEDRDPD
QRVVAVRTERMIEQLAWLRENGYRPVTVDQILAARNGGPELPAKAILLTFDDGYSSFYTR
VLPVLRSYHWPAVLAPVGTWIDTPADQPVNFAGELRPRSQFLTWAQVREISRSGLVEIAA
HTDHSHLGILANPQGNLQPAAATRRFDAASGRYESEADFQARMRQDVTAISNKILAVAGY
RPRIWVWPYGTADGSTLQVVDSQGFKLALTLDDGLDTLDNLMSSPRFLVVSDPDGIHFSN
SIVGAETAAPMRVVHVDLDNVYDPDPKQQEVNLGKLVQRMADLGANTVFLQAFADPKGDG
LVQSLYFPNRHLPMRADLFDRVAWQLRTRAHVKVYAWMPVLSFALDARLPRVTRWDPATG
QSTIDPKQYQRLSPFDPNVRRQIGDLYEDVARMTSVDGILFHDDAVLSDFEDASPGALRA
YAAQGLPGSMAALRDDPATLQRWTRFKSRYLIDFTHELAAKVRAIRGPQVQTARNLFAEP
IINPQSETWFAQNLDDFLVSYDWTAPMAMPLMEGQSQRHSGPWLEALVDQVRARPGALQR
TVFELQARDWARKPASDLSAQQLADWMGRLKRQGATNFGYYPDNFLENSPDLKTLRPALS
NKWSP
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatcaaccgttgcatcctcctgctgggagccctggttctcagcgcctgttcc
cagcccgccgccgactttctcgccccggcgcaacggccgttgcccaacaccgaggcgccc
tggccgaagaaccacgtgctgggcattgcctaccacgacatcgaggatcgcgacccggac
caacgggtggtggcggtgcgcaccgagcggatgatcgagcaactggcctggttgcgggaa
aacggctaccggcccgtgaccgtggaccagatcctggcggcgcgtaacggcggccccgaa
ctgccggccaaggccatcctgctgaccttcgatgacggctattcgagcttctacacccgg
gtgctgccggtgctgcgcagctatcactggcctgcggtgctggcgccggtgggtacctgg
atcgacaccccggccgaccagccggtgaacttcgccggcgagctgcggccccgctcacag
ttcctgacctgggcgcaggtccgggaaatctcccgttccgggctggtggaaatcgccgcc
cataccgaccacagccacctgggcattcttgccaaccctcagggcaacctgcagccggcg
gcggcgacccgccgttttgatgccgcctccgggcgctatgaaagcgaggcggatttccag
gcgcggatgcgccaggacgtgaccgccatctcgaacaagatcctggccgtggccggctat
cgcccgcggatctgggtctggccctatggcacggccgacggctccaccctgcaagtggtg
gacagccagggcttcaagctggccctgaccctggacgacggcctggacacactcgacaac
ctgatgagcagcccgcgtttcctggtggtctcggacccggacggcatccacttctccaac
agcattgtcggcgccgagaccgccgcgcccatgcgcgtggtgcacgtggacctggacaac
gtctacgacccggaccccaagcagcaggaggtcaacctcggcaagctggtgcagcgcatg
gccgacctgggggccaacaccgtattcctccaggccttcgctgaccccaagggcgacggc
ctggtgcagtcgctgtatttccccaaccggcacctgccgatgcgcgccgacctgttcgac
cgggtcgcctggcaattgcgcacccgggcccacgtcaaggtctatgcctggatgccggtg
ctcagcttcgccctggacgcccggctgccccgggtcacgcgctgggatccggccaccggc
cagagcaccatcgatcctaagcagtaccagcggctgtcgcccttcgaccccaatgtgcgc
cggcagatcggcgacctctacgaggatgtggcgcgcatgacgtcggtggacggcattctg
ttccacgacgacgccgtgctctcggatttcgaagacgccagccccggggccttgcgcgcc
tatgcagcccagggcctgccgggttccatggccgccctgcgcgacgatccggccaccctg
cagcgctggacacgcttcaagagccgctacctgatcgacttcacccatgagctggccgcc
aaggtccgggcgattcgcgggccgcaggtgcagaccgcgcgcaacctgttcgccgagccg
atcatcaacccgcagagtgaaacctggttcgcccagaacctcgatgatttcctggtcagc
tacgactggaccgcgcccatggccatgccgctgatggaaggccagagccagcggcattcc
gggccctggctcgaagccctggtggaccaggtgcgcgcccgccccggtgccttgcagcgc
acggtgttcgagctgcaggcccgggactgggcccgcaagcccgccagcgacctctccgcc
cagcaactggcggactggatgggccgcctcaagcgccagggcgcgaccaatttcggctac
tacccggacaacttcctcgagaactcaccggacctgaagactctgcggcccgcgctctcc
aacaaatggagcccttga
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