KEGG   Pseudomonas protegens Cab57: PPC_0281
Entry
PPC_0281          CDS       T03613                                 
Symbol
lpdA_2
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ppro  Pseudomonas protegens Cab57
Pathway
ppro00010  Glycolysis / Gluconeogenesis
ppro00020  Citrate cycle (TCA cycle)
ppro00260  Glycine, serine and threonine metabolism
ppro00280  Valine, leucine and isoleucine degradation
ppro00310  Lysine degradation
ppro00380  Tryptophan metabolism
ppro00620  Pyruvate metabolism
ppro00630  Glyoxylate and dicarboxylate metabolism
ppro00640  Propanoate metabolism
ppro00670  One carbon pool by folate
ppro00785  Lipoic acid metabolism
ppro01100  Metabolic pathways
ppro01110  Biosynthesis of secondary metabolites
ppro01120  Microbial metabolism in diverse environments
ppro01200  Carbon metabolism
ppro01210  2-Oxocarboxylic acid metabolism
ppro01240  Biosynthesis of cofactors
Module
ppro_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ppro_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppro_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
ppro_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ppro_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ppro00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PPC_0281 (lpdA_2)
   00020 Citrate cycle (TCA cycle)
    PPC_0281 (lpdA_2)
   00620 Pyruvate metabolism
    PPC_0281 (lpdA_2)
   00630 Glyoxylate and dicarboxylate metabolism
    PPC_0281 (lpdA_2)
   00640 Propanoate metabolism
    PPC_0281 (lpdA_2)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PPC_0281 (lpdA_2)
   00280 Valine, leucine and isoleucine degradation
    PPC_0281 (lpdA_2)
   00310 Lysine degradation
    PPC_0281 (lpdA_2)
   00380 Tryptophan metabolism
    PPC_0281 (lpdA_2)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PPC_0281 (lpdA_2)
   00670 One carbon pool by folate
    PPC_0281 (lpdA_2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppro04147]
    PPC_0281 (lpdA_2)
Enzymes [BR:ppro01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PPC_0281 (lpdA_2)
Exosome [BR:ppro04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PPC_0281 (lpdA_2)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_binding_3 FAD_binding_2 FAD_oxidored HI0933_like AlaDh_PNT_C Thi4 NAD_binding_8 DAO 3HCDH_N 2-Hacid_dh_C Amino_oxidase UDPG_MGDP_dh_N Lycopene_cycl
Other DBs
NCBI-ProteinID: BAO59628
LinkDB
Position
314001..315455
AA seq 484 aa
MSESYDVIVIGAGPGGYVAAIRAAQLGLKTVCIERYKGKDGKTALGGTCLNVGCIPSKAL
LDSSHHYYEARNGFEVHGIGIRNPQMDVPAMLARKDNVVRNFNGGIASLFKANGVALLEG
HGKLLANKEVEVTAADGSTQRISATSIILAPGSRPIDIAAAPLTDKVIVDSTGALEFTSV
PKRLGVIGAGVIGLELGSVWARLGAEVTVLEALDSFLPAVDVQIAKEAQKILGKQGLDIR
LGARVTASEVQGDSVKVSLSEAGEDKQQTFDRLIVAVGRRPLTTDLLAPDSGVQLDERGF
IHVDGQCLTSVPGVFAIGDVVRGPMLAHKASEEGVMVAEGIAGHRHPLNYDLIPSVIYTH
PEIAWVGQTEQALKAEGVELNIGTFPFAASSRAMAANDTAGLVKVIADARTDRVLGVHVI
GPGAAELVQEGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALSVNGQAIHIGNRKKKAP
ASVK
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgagtgaaagttacgatgtgatcgttattggtgcgggtcccggcggctatgtcgccgcc
atccgggccgcgcaactggggctcaagacagtctgcatcgagcgctacaagggcaaggat
ggcaagactgccctgggcgggacgtgcctgaacgttggctgcattccctccaaggcactg
ctggacagttcccatcactactacgaagcgcgcaacggtttcgaagtgcacggcatcggc
atccgcaatccgcagatggatgtgccggccatgctggcgcgcaaggacaacgtggtgcgc
aatttcaacggcggcattgcctcgctgttcaaggccaatggcgtggccctgctggaaggt
cacggcaagctgctggccaacaaggaagtggaggtcaccgcggccgatggcagcacccag
cgcatcagcgccaccagcatcattctcgcccccggctcacggcctatcgatatcgccgcc
gcgccgctgacggacaaggtgatcgtcgattccaccggagccctggaattcaccagcgtg
cccaagcgtcttggggtgatcggcgccggcgtcatcggcctggaactgggctcggtctgg
gcccgcctgggcgccgaagtgacggtgctcgaagccctcgacagcttcctgccggcagtg
gacgtacagatcgccaaggaggcgcagaagatcctcggcaagcaaggcctggatatccgt
ctgggtgcccgggtgacggcgtccgaagtgcagggcgacagcgtcaaggtcagcctcagc
gaggccggcgaagacaagcagcagaccttcgaccgcctgatcgtcgccgtgggtcgtcgg
cccctgaccaccgacctgttggcgcctgacagcggcgtacagctggatgagcgcggcttc
atccacgtcgacggtcagtgcctgaccagcgtgcccggggtgttcgccattggcgacgtg
gtacgcggcccgatgctggcgcacaaggcttctgaagagggggtgatggtggccgagggg
attgccgggcatcggcacccgttgaactacgacctgatcccctcggtaatctacacccac
ccggaaatcgcctgggtcggccagaccgagcaggctctcaaggccgagggcgtcgagttg
aacatcggcaccttcccgttcgctgccagcagccgggccatggcggccaacgacaccgcc
gggctggtcaaggtaattgccgatgcgcgcaccgaccgggtactgggcgtgcatgtgatc
gggccgggcgctgcggaactggtccaggaaggcgcgatcggcatggagttcggcaccagc
gccgaagacctggggatgatggtgttctcccatccgaccctgtccgaagccctgcatgaa
gccgcactgtcggtgaatggccaggcgattcatatcggcaatcgcaagaagaaagctccc
gccagcgtcaaatag

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