Pseudomonas protegens Cab57: PPC_0288
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Entry
PPC_0288 CDS
T03613
Name
(GenBank) S1 RNA-binding domain-containing protein
KO
K06959
protein Tex
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
PPC_0288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
BAO59635
LinkDB
All DBs
Position
complement(321599..323923)
Genome browser
AA seq
774 aa
AA seq
DB search
MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRY
LRELDERRISILASIEEQGKLTPELARDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPNLAPETEAARFVDAEKGVADVKAALEGAKYILMERFAEDASLLEKLRN
FLKQEATISARVVAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG
DELPGTMHPCEGMIGQHVGIQNQNRAADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAE
TEAINVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHN
KWDQTLGILAALCAKHSVDLIAIGNGTASRETDKLAAELIKKYPAMKMTKVMVSEAGASV
YSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVSHRDEHGAFKTRAALKKVARL
GEKTFEQAAGFLRVMNGDNPLDASAVHPEAYPLVQRIAADTGRDIRSLIGDSGFLKRLDP
KKFTDETFGLPTVTDILQELDKPGRDPRPEFKTAEFQDGVEDLKDLQLGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMG
DTPGEKIDGARGSRPGSAPRSSQGNAPRKESAAPAPSNNAMASLFANAKQLKKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcattgccgaggaactcggcgtacgcccacaacaggtcgaa
gcggccgtcgctctattggatgaaggctccaccgtgcccttcatcgcccgctaccggaaa
gaagtcaccggcagcctcgatgacacccagctgcgtcatctggaagagcgcctgcgctac
ctgcgagaactcgacgaacggcggatcagcatcctggccagcatcgaagagcaaggcaag
ctgaccccggagctggcccgcgacatcaagctggccgacaccaagacccgcctcgaagac
ctttacctgccttacaagcagaagcgccgcaccaagggccagatcgccctggaagccggc
ctcggcgaactggccgacggcctgttcaacgacccgaacctggctccggaaaccgaagcc
gcacgcttcgtcgacgccgaaaaaggcgtggccgacgtcaaggccgccctggaaggcgcc
aagtacatcctgatggagcgcttcgccgaagacgccagcctgctggaaaagctgcgcaat
ttcctcaagcaggaagcgaccatcagcgcccgcgtggtggctggcaaggaagaggaaggc
gccaagttccgtgactacttcgaacacgatgaaccactcaaaagcatgccgtcgcaccgc
gccctggcaattttccgtggccgcaacgaaggcattctcagctccgcgctgaaagtcggt
gacgagctgccgggcaccatgcacccctgcgaaggcatgatcggccagcacgtgggcatc
cagaaccagaaccgtgccgccgacaaatggctgggtgaagtggtgcgctggacctggaag
gtcaagctctacacccacctggaaaccgacctgctgggcgagctgcgcgatggcgcggaa
accgaggcgatcaacgtcttcgcccacaacctgcacgacctgctgctggccgctccggcc
ggcccgcgcgccaccctgggcctggacccgggcctgcgcaccggctgcaaggtggcggtg
gtggatgccaccggcaagctgctggaccacgccaccgtctacccccatgtgccgcacaac
aagtgggaccagaccctgggcatactggctgccctgtgcgccaagcactcggtggacctg
atcgccatcggcaacggcaccgccagccgggaaaccgacaagctggcggccgagctgatc
aagaagtacccggccatgaagatgaccaaggtcatggtctccgaagccggtgcatcggtg
tactcggcctcggagctggcggccaaggaattcccggacctggacgtatcgatccgtggc
gcggtgtccatcgcccgccgcctgcaggatccactggccgagctggtgaagatcgacccg
aaatccatcggtgtcggccagtaccagcacgatgtctcgcaactgaaactggcccgtggc
ctggacgcggtggtggaagactgcgtgaacgccgtgggcgtcgacgtcaacaccgcctcc
gtggccctgctggcgcggatctccggcctcaacgcgaccctggcgcagaacatcgtcagc
caccgcgacgaacacggtgccttcaagacccgcgccgcgctgaaaaaagtcgcccgcctg
ggtgaaaagaccttcgaacaggccgccggcttcctgcgtgtgatgaacggcgacaacccg
ctggacgcttccgcagtgcacccggaagcctacccgctggtacaacgcatcgccgccgac
accggccgcgacatccgctcgctgatcggcgacagcggcttcctcaagcgcctggacccg
aaaaagttcaccgacgaaaccttcggcctgcccaccgtcaccgacatcctccaggaactg
gacaagcccggccgcgacccgcgccccgagttcaagaccgccgagttccaggacggtgtc
gaagacctcaaggacctgcaactggggatgatcctcgaaggcgtggtgaccaacgtcacc
aatttcggggccttcgtcgacatcggcgtgcaccaggacggcctggtgcacatttcggcg
ctgtcggagaagttcatcaaggacccacgcgaagcggtgaaggccggtgacgtggtgaaa
gtgaaggtcatggaagtcgatatcccgcgcaaacgcgtcggcctgtcgatgcgcatgggc
gacaccccgggcgagaagatcgacggtgcccgtggctcccgccccggctcggcgccacgc
tcctcccagggcaatgcaccgcgcaaggagagcgccgcgcccgccccgagcaacaacgcc
atggcctcgctgttcgccaacgccaagcagttgaagaaacgctga
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