Pseudomonas protegens Cab57: PPC_0340
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Entry
PPC_0340 CDS
T03613
Symbol
fdhA
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00630
Glyoxylate and dicarboxylate metabolism
ppro00680
Methane metabolism
ppro01100
Metabolic pathways
ppro01120
Microbial metabolism in diverse environments
ppro01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PPC_0340 (fdhA)
09102 Energy metabolism
00680 Methane metabolism
PPC_0340 (fdhA)
Enzymes [BR:
ppro01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
PPC_0340 (fdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_21
Fer4_Nqo3
Fer4_6
Fer4_9
Fer2
Fer4_15
Fer4_2
Fer4_18
Fer4_16
Fer4_4
TPP_enzyme_M
Fer4_NDSU1
Motif
Other DBs
NCBI-ProteinID:
BAO59687
LinkDB
All DBs
Position
complement(378477..381374)
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AA seq
965 aa
AA seq
DB search
MITLFDPATDIDLNAVDFGTPARDSQVQVSLNIDGRSISVPQGTSVMRAAALMGTTIPKL
CATDSLEAFGSCRMCLVEIDGMRGYPASCTTPVSEGMVVHTQTPKLATLRRNVMELYISD
HPLDCLTCSANGNCELQTVAGQVGLREVRYGYDGANHLQDQKDTSNPYFDYDPSKCIVCN
RCVRACEETQGTFALTISGRGFESRVAAAGGDNFLDSECVSCGACVQACPTATLMEKSVV
QMGQPERAVITTCAYCGVGCSFRAEMKGDQLVRMVPDKNGQANHGHSCVKGRFAWGYATH
PDRITKPMIRKHISDPWQEVSWDEAVSYAASELRRIQFKYGRDSIGGITSSRCTNEETYL
VQKLVRAAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQSFDSVMQADVILVMGANPSD
AHPVFGSQLKRRLREGAKLIVIDPRRIDLVDSVHARAELHLALRPGTNVAMLNALAHVIV
TEGLVNQEFVSARCEPEAFALWSAFVSRADNSPEVLGAICGVPAADIRAAARLYATGGNA
AIYYGLGVTEHSQGSTSVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHEL
PGYRHISNQAVRQQFEQAWNVTLQADPGLRIPNMFEAALGGSFKGLYCQGEDIAQSDPNT
QHVTAALSAMECVVVQDIFLNETAKFAHVFLPGSSFLEKDGTFTNAERRISRVRKVMEPL
GGKADWEGTLALAAALGYPMHYSHPSEIMDEIARLTPTFTGVSYASLDRHGSLQWPCNDA
APDGTPTMHIDEFVRGKGRFMLTGYVPTDEKVNGRYPLLLTTGRILSQYNVGAQTRRTDN
VAWHAEDRLEIHPTDAESRGINEGDWVGIGSRAGQTVLRARVTERVAPGVVYTTFHFPES
GANVITTDNSDWATNCPEYKVTAVEVSRVYHPSEWQKRYQAFSEEQHRLLDKRGRSRGGK
AEVRR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgatcactcttttcgacccagccacagatatcgatctcaatgccgtggacttcggcacc
ccggcccgcgacagccaggtgcaggtcagcctgaacatcgacgggcgcagcatcagcgtg
ccccagggcacctcggtgatgcgcgccgcggccctgatgggcaccaccattcccaaactc
tgcgccaccgacagcctggaagccttcggttcgtgccgcatgtgcctggtggagatcgac
ggcatgcgcggctacccggcctcctgcaccacccctgtcagcgaaggcatggtggtgcat
acgcaaactccgaaactggcgaccctacgccgcaacgtgatggagctgtacatctccgac
caccccctggactgcctgacctgctcggccaatggcaactgcgaactgcagaccgtcgcc
ggccaggtgggcctgcgggaagtgcgctacggctatgacggcgccaaccacctgcaggat
cagaaagacacctccaacccctacttcgactacgacccgagcaagtgcatcgtctgcaac
cgctgcgtgcgcgcctgcgaggaaacccagggcaccttcgccctgaccatcagcggccgc
ggcttcgaatcccgggttgcggcagccggtggcgacaacttcctggactccgaatgcgtg
tcctgcggcgcctgcgtgcaggcctgccccaccgccaccctgatggaaaagagcgtggtg
cagatgggccagccggagcgggcggtgatcaccacctgcgcctactgcggcgtgggttgc
tcgttccgcgccgagatgaagggcgaccagctggtgcgcatggttccggacaagaacggc
caggccaaccacggccactcctgcgtcaagggccgcttcgcctggggctacgccacccac
ccggaccgcatcaccaagccgatgatccgcaagcacatcagcgacccttggcaggaagtc
agctgggacgaagcagtgtcctacgccgccagcgaactgcggcgcatccagttcaagtac
ggccgcgattccatcggcggcatcacctccagccggtgcaccaacgaggaaacctacctg
gtgcagaagctggtgcgggcggccttcggcaacaacaacgtcgatacctgcgcccgggtc
tgccactcgcccaccggctacggcctcaagcagaccctgggggaatccgccgggacccag
agcttcgactcggtgatgcaggccgacgtgatcctggtgatgggcgccaaccccagcgac
gcccacccggtgttcggctcccagctcaagcgccgcctgcgtgaaggggccaagctgatc
gtcatcgacccgcggcgcatcgacctggtggactcggtgcacgcccgcgccgagctgcac
ctggccctgcgccccggcaccaacgtggccatgctcaatgccctggctcatgtgatcgtc
actgaagggctggttaaccaggagttcgtcagcgcccgctgcgagcccgaggccttcgcc
ctgtggagcgctttcgtcagccgcgcggacaactcgccggaagtgctcggcgccatctgc
ggcgtgcccgccgccgacatccgtgccgccgcccgcctctacgccaccggcggcaacgcg
gcgatctactacggcctgggggtcactgagcacagccagggcagcacctcggtcatgggc
atcgccaacctggccatggccaccggcaacatcggccgcgaaggggtgggcgtgaacccg
ctgcgagggcagaacaacgtccagggttcctgcgacatgggctccttcccccacgagctg
ccgggctatcggcacatctccaaccaggcggtgcgccagcagttcgagcaggcctggaac
gtcaccctgcaggccgatcccgggctacgcattcccaacatgttcgaagcagctctgggc
ggcagcttcaagggcctgtactgccagggcgaggacatcgcccagagcgaccccaacacc
cagcacgtgaccgcggccctgtcggccatggaatgcgtggtggtgcaggacatcttcctc
aacgaaaccgccaagttcgcccacgtgttcctgccgggcagctcgttcctggaaaaggac
ggcactttcaccaacgccgaacggcgcatctcccgggtgcgcaaggtcatggagcccctg
ggcggcaaggccgactgggaaggcaccctggccctggccgcggccctgggctacccaatg
cactacagccatccctcggaaatcatggatgagatcgcacgcctgaccccgaccttcacc
ggcgtcagctacgccagcctggaccgccacggcagcctgcaatggccgtgcaacgacgcc
gcgccagacggcacgccgaccatgcacatcgacgagttcgtgcgtggcaaggggcgcttc
atgctcaccggctacgtgcccaccgacgagaaggtcaacggtcgctacccgctgctgctg
accaccggccggatcctcagccagtacaacgtcggcgcccagacccggcgcaccgacaac
gtcgcctggcacgccgaggaccgcctggaaatccaccccaccgatgccgagagccggggc
atcaacgaaggcgattgggtgggcatcggcagccgcgccgggcagaccgtgctgcgggcc
cgggtcactgagcgggtggcaccgggggtggtctacaccaccttccacttccccgagtcg
ggggccaacgtgatcaccaccgacaactccgactgggccaccaactgtccggaatacaag
gtcaccgcggtggaagtcagccgcgtctaccacccttccgaatggcagaagcgctaccag
gcattcagcgaagagcagcatcgcctgctggacaagcgtggccgctcccggggcggcaag
gcggaggtgcgccgatga
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