Pseudomonas protegens Cab57: PPC_0503
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Entry
PPC_0503 CDS
T03613
Name
(GenBank) histidine kinase, HAMP region: chemotaxis sensory transducer
KO
K03406
methyl-accepting chemotaxis protein
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02020
Two-component system
ppro02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPC_0503
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PPC_0503
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppro02035
]
PPC_0503
Bacterial motility proteins [BR:
ppro02035
]
Flagellar system
Chemotaxis proteins
MCPs
PPC_0503
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
HAMP
TarH
IFT57
DUF948
ISG65-75
TetR_C_1
ArlX
Motif
Other DBs
NCBI-ProteinID:
BAO59850
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All DBs
Position
complement(560843..562453)
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AA seq
536 aa
AA seq
DB search
MNIAPRAFLGFAMIGGLMLILGVFALNQMSKIRGAAEDITSSSVPSIKSLDEFTQLTLRL
RVLSYRLLVNREPDVQQKTIELLEMRNQQIRAAQVIYEKFITSPEEKSAYEQYLQLLGQY
RQIEERMKSLSRNNQVDELRNLLNTELLNNSEAMNTVLNRLLEINTQQTVDTNQQAAEQY
SSAFNLVVALLVLATGLTFLFAWLLTRSITQPIANALGAAEEIAEGNLTRPIKVDGSDEA
GRLLQAMAKMQEKLRDTLQRISGSATQLASAAEELNSVTEESARGLTQQNNEIEQAATAV
NEMTSAVEEVARNAVSTSEASKNATASAGDGRDLVQETVSAIERMSSDVQGTASLIGDLA
NESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTS
EIERMIGSIQSGTEHAVDSMRNSTERAESTLNIARGAGLSLDTINSAIIEINERNLVIAS
AAEEQAQVAREVDRNLVNIRDLSVQSSTGANQTSAASNELSRLAVDLNGMVARFRL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgctccgcgggccttcctcggcttcgccatgatcggcggcttgatgctgatc
ctcggggtgttcgccctgaaccagatgagcaagatccgcggcgccgccgaagacatcacg
tcgagcagcgtgccaagcatcaagagcctcgacgaattcacccagctcaccctgcgcctg
cgggtgctgtcctaccgcttgctggtgaaccgtgagccggacgtgcagcaaaagaccatc
gaactgctggaaatgcgcaaccagcagatccgcgccgcccaggtcatctacgagaaattc
atcaccagcccggaagaaaagtccgcctacgagcagtaccttcagctgctgggccagtac
cggcagatcgaagagcggatgaagagcctgtcgcgcaacaatcaggtggatgagctgcgt
aacttgctcaacaccgaactactgaacaactccgaagccatgaataccgtgctcaaccgc
ttgctggagatcaacacccagcagaccgtggacaccaaccagcaagccgccgagcagtac
tcctcggccttcaacctggtggtggcgctgctggtgctggctactggcctgaccttcctc
ttcgcctggctgctgacccgcagcatcacccagcccatcgccaacgccctgggcgccgcc
gaggaaatcgccgagggcaacctgacccggccgatcaaggtcgatggcagtgacgaggcc
gggcgcctgttgcaggccatggccaagatgcaggaaaaactgcgcgacaccctgcagcgc
atctccggttccgccacccagttggcttcggcggctgaagagctcaacagcgtcaccgag
gaaagcgcccgcggcctgacccagcagaacaacgagatcgaacaggccgccaccgcggtc
aatgaaatgaccagcgccgtggaagaagtggcgcgcaacgcggtgagcacctccgaagcc
tcgaagaatgccaccgcttccgcgggcgacggccgcgacctggtgcaggaaaccgtgtcg
gccatcgagcgcatgagctccgacgtgcaaggcaccgccagcctgatcggcgacctggcc
aacgagtcccgggacatcggcaaggtgctggacgtgattcgcggcctggccgaccagacc
aacctgctggccctcaatgccgccatcgaggccgcccgtgccggtgaggccggtcgcggt
tttgccgtggtcgccgacgaagtccgcgccctggcccaccgcacccagcagtccaccagc
gaaatcgaacgcatgatcggcagcatccagagcggcaccgagcacgccgtggattctatg
cgcaacagcaccgaacgcgccgaatcgaccctgaatatcgcccggggtgccggcctgtcc
ctggacaccatcaacagcgccatcatcgagatcaacgaacgcaacctggtgatcgccagc
gccgctgaagaacaggcccaggtggcccgggaagtggaccgcaacctggtgaacatccgc
gacttgtcggtgcagtcctccaccggtgccaaccagaccagtgcagccagcaacgagctg
tcgcgcctggccgtggacctcaacggcatggttgcccgcttccgcctctga
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