Pseudomonas protegens Cab57: PPC_0527
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Entry
PPC_0527 CDS
T03613
Name
(GenBank) lipopolysaccharide core biosynthesis protein RfaG
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00540
Lipopolysaccharide biosynthesis
ppro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PPC_0527
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppro01005
]
PPC_0527
Lipopolysaccharide biosynthesis proteins [BR:
ppro01005
]
Core region
PPC_0527
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_transf_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
BAO59874
LinkDB
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Position
599393..600517
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AA seq
374 aa
AA seq
DB search
MQLAFVLYKYFPFGGLQRDFMRIALECQRRGHQIRVYTLIWEGDVPPGFEVLVAPVKALF
NHRRNEKLSAWMEADLAKRPVDRLVGFNKMPGLDVYYAADGCFEDKAQNLRHSLYRRWGR
YRHFAEYERAVFAKDAKTEILMISEVQQPLFIKHYDTPLERFHLLPPGIAQDRRAPANAT
EIRADFRREFKLKDDDLLLVQIGSGFKTKGVDRSLKALAALPSALKKRTRLFVIGQDDPK
VFQVQSAALGLSDQVQFMKGRSDIPRFLLGADLLIHPAYNENTGTVLLEALVAGLPVLVS
AVCGYAHYIAEAQSGLVLDEPLEQAQLNQYLTTMLTDDAARATWSRNGLAFAETADLYSM
PQHAADVILAEQHR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggcttttgtcctttataagtatttccccttcggcggcctgcagcgcgatttc
atgcgcatcgccctggagtgccagcggcgcgggcaccagatccgtgtctacaccctgatc
tgggaaggcgatgtccctcccggtttcgaagtgctggtggcgccggtcaaggcgctgttc
aaccatcgtcgcaatgaaaagctcagcgcctggatggaggccgacctggccaagcgcccg
gtggaccggctggtgggtttcaacaagatgccggggctggacgtgtactacgccgcagat
ggctgtttcgaggacaaggcacagaacctgcggcactccctgtaccggcgctggggccgt
taccggcactttgccgagtacgagcgcgcagtgttcgccaaggacgccaagaccgagatc
ctgatgatctccgaggtccagcagccgctgttcatcaagcactacgacaccccgctggag
cgcttccatctgctgccgccggggatcgcccaggaccgccgggcaccggccaacgccacc
gagatccgggcggattttcgtcgcgaattcaagctcaaggatgacgacctgctgctggtg
cagatcggttccgggttcaagaccaagggtgtggaccgcagcctcaaggccctggcggca
ttgccctcggcgctgaaaaaacgcacccggctgtttgtaatcggccaggacgaccccaag
gtattccaggtgcaaagtgctgcgctggggttgagcgaccaggtgcagttcatgaagggc
cgcagcgatatcccgcggttcctgctgggcgccgacctgctgattcacccggcctacaac
gaaaacaccggcaccgtattgctggaggccctggtggccggcctgccggtgctggtcagc
gcggtctgcggttatgcccattacattgccgaggcccagagcggcctggtgctggatgag
ccgctggaacaggcgcagctcaatcaatacctcaccaccatgttgaccgacgacgctgca
cgcgcgacctggagccgaaatggcctggcgttcgccgagacggccgacctttacagcatg
ccgcagcacgctgcggatgtgattctggcggagcaacaccgatga
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