KEGG   Pseudomonas protegens Cab57: PPC_0559
Entry
PPC_0559          CDS       T03613                                 
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
ppro  Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:ppro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppro03032]
    PPC_0559
   03036 Chromosome and associated proteins [BR:ppro03036]
    PPC_0559
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppro02048]
    PPC_0559
Enzymes [BR:ppro01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PPC_0559
DNA replication proteins [BR:ppro03032]
 Prokaryotic type
  DNA Topoisomerases
   PPC_0559
Chromosome and associated proteins [BR:ppro03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    PPC_0559
Prokaryotic defense system [BR:ppro02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    PPC_0559
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_2 HATPase_c_3 TOPRIM_C
Other DBs
NCBI-ProteinID: BAO59906
LinkDB
Position
634903..636807
AA seq 634 aa
MATPSASSYNADAIEVLSGLDPVRKRPGMYTDTTRPNHLAQEVIDNSVDEALAGHAKSIQ
VILHADHSLEVSDDGRGMPVDIHPEEGVSGIELILTKLHAGGKFSNKNYQFSGGLHGVGI
SVVNALSNQVRVRVKRDGNEYQMTFADGYKASELEVVGTVGKRNTGTSVYFAPDPKYFDS
PKFSVSRLKHVLKAKAVLCPGLLVSFEDKSSGEKVEWHYEDGLRSYLVDAVSEFERLPAE
PFCGSLAGNKEAVDWALLWLPEGGDSVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCE
FRNLLPRGLKLAPEDVWERIAFVLSMKMQDAQFSGQTKERLSSREAAAFVSGVVKDAFSL
WLNANPELGMQLAELAISNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPMRSELFL
VEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGSEVLASQEVHNIAVAIGVDPGAED
MSQLRYGKICILADADSDGLHIATLLCALFVQHFRPLVDAGHVYVAMPPLYRIDLGKEIY
YALDEAERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLDDV
EATAEIMDMLLAKKRAGDRKSWLESKGNLAEVLA
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggccactcccagcgctagctcttataacgcagacgccatcgaagtcctctcgggactc
gacccggtgcgcaaacgcccgggcatgtacaccgacaccacgcggcccaaccatttggcc
caggaagtcatcgacaacagcgtcgacgaagccctggccggccatgcgaagtcgatacag
gtcatcctgcacgccgaccattccctggaagtgtccgacgacggccgcggcatgcccgtg
gacatccacccggaagaaggcgtgtccgggatcgagctgatcctcaccaagctccacgcc
ggcggcaagttctccaacaagaactaccagttctccggcggtctgcacggggtcggcatc
tccgtggtcaacgccttgtcgaaccaggtacgggtgcgggtcaagcgcgacggcaacgaa
taccagatgactttcgccgacggctacaaggcctccgagctggaagtggtcggcaccgtg
ggcaagcgcaacaccggcaccagcgtgtacttcgctccggacccaaaatacttcgactcg
ccgaaattctccgtcagccgtctcaagcacgtgctcaaggccaaggccgtactctgcccg
gggctgctggtgagcttcgaggacaagtccagcggcgagaaggtcgagtggcactacgaa
gatggcctgcgctcctacctggtggatgcggtcagtgaattcgaacgcctgccggccgag
ccgttctgcggcagcctggcagggaacaaggaagcggtggactgggccctgttgtggctg
cccgaaggcggcgacagcgtccaggaaagctacgtcaacctgatccccacggcccagggc
ggcacccatgtcaacggtctgcgccagggcctgctggatgccatgcgcgagttctgcgag
ttccgcaacctgttgccccgcggcctgaagctggccccggaagacgtctgggagcgcatt
gcctttgtcctgtcgatgaaaatgcaggatgcgcaattctccggccagaccaaggagcgc
ctgtcatcccgcgaggcggcggcgttcgtttccggtgtggtcaaggacgccttcagcctg
tggctcaacgccaaccccgagctgggcatgcaactggcggagctggccatcagcaacgcc
gggcgccgcttgaaggccagcaagaaggtcgagcgcaagcgcattacccagggcccggca
ctgccaggcaagctggcggactgtgccggccaggacccgatgcgctccgagctgttcctg
gtggagggtgactccgccggcggttcggccaagcaggcgcgggacaaggagttccaggcg
atcctgccgttgcgcggcaagatcctcaacacctgggaagtggacggcagcgaggtcctg
gccagccaggaagtgcacaacatcgccgtggccatcggggtcgatccgggcgccgaggac
atgagccagctgcgctacggcaagatctgcatcctcgccgacgccgactccgacggcttg
cacatcgctaccttgctgtgtgccttgttcgtccagcatttccgtccgctggtggatgcc
ggtcacgtctacgtggccatgccgccgctgtaccgcatcgacctgggcaaggagatctac
tacgccctggatgaagccgagcgcgacggcattctcgaccgcctggtggccgagaagaag
cgcggcaagccacaggtcacccgattcaaggggctgggtgaaatgaacccgccgcaactg
cgcgagaccaccatggacccgaacacccggcgcctggtgcagttgaccctggacgatgtc
gaggccaccgcggaaatcatggacatgctgctggccaagaagcgcgccggtgatcgcaag
tcctggctggagtccaagggcaacctggccgaggtgctggcctga

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