Pseudomonas protegens Cab57: PPC_0756
Help
Entry
PPC_0756 CDS
T03613
Name
(GenBank) diguanylate cyclase (GGDEF) domain-containing protein, YfiN family
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PPC_0756
Enzymes [BR:
ppro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
PPC_0756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
SMP_2
DUF7801
Motif
Other DBs
NCBI-ProteinID:
BAO60103
LinkDB
All DBs
Position
866295..867563
Genome browser
AA seq
422 aa
AA seq
DB search
MKLFKPNARPTLRSVIGRGHLIVALLAISMASLSLTFLGVLALRVYADHNLHLIARSISY
TVEAAVVFNDSVVATEALALIASTEEVADAKVYDSQGQLLASWQRPESGFLTNLEMHVAS
AFLEKPISLPILHQGREIGTINVTGHGGSLLRFLLSGLVGIVLCIALSAWLALYLARRQL
RGITGPLRSLADVAHAARRERAFDQRVPPAEIAELDNLGNDFNALLDELEAWQTHLQSEN
ETLAHQASHDSLTGLPNRAFFEGRLIRALRSANKLNERMAVLFLDSDRFKEINDNFGHAA
GDAVLVAVATRIRAQLREDDLVARLGGDEFAVLLTPLHRVEDAQRIADKIISSMEVPIQL
PGSLSILTSLSIGIAVYPDHGATPGSLLNAADAAMYQAKRGSRGGQHTVGAELPIVQVQN
RS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgttcaagcccaacgcccgccctacactgcggtcggtcatcggtcgcggccac
ctgatcgtcgctctgctggcgatctccatggccagcctgtccctgacctttctcggagtg
ttggccctgcgcgtgtacgccgatcacaacctgcacctgatcgcccgctccatcagctac
accgtggaagctgcagtggtgttcaacgacagtgtggtggccaccgaggccctggccctg
atcgcctccaccgaagaggtggccgacgccaaggtgtatgacagccagggccagttgctg
gccagctggcagcgcccggaaagcggctttctgaccaatctggaaatgcacgtcgccagc
gcctttctggaaaagcccatcagcctgccgatcctgcaccaggggcgggaaatcggcacc
atcaatgtcaccggccatggcggcagcctgttgcggtttctcctcagtggcctggtgggc
atcgtgctgtgcattgccctcagcgcctggttggcgctgtacctggcgcgccgccagctg
cggggcatcaccgggccgttgcgcagcctcgccgatgtggcccacgcggcccggcgcgag
cgggccttcgatcagcgggtgccgcctgcggaaatcgccgaactggacaacctgggcaac
gacttcaacgccctgctcgatgagctggaggcctggcagacccatctgcaaagcgagaat
gaaaccctggcccaccaggccagccacgacagcctgaccggcctgcccaaccgggcgttc
ttcgaaggccggctgatccgtgccctgcgcagcgccaacaagctcaacgagcgcatggcg
gtgctgtttctcgacagcgaccggttcaaggagatcaacgataacttcggccacgccgcc
ggcgatgcggtgctggtggctgtggccacgcggattcgcgcgcagttgcgcgaggacgac
ctggtggcgcgcctgggcggggacgaatttgccgtgctgctgaccccgctgcaccgggtc
gaggatgcccagcgcatcgccgacaagatcatcagcagcatggaagtaccgattcaactg
cccggcagcctgtcgatcctgacatcgctgagtatcggtattgccgtgtacccggatcat
ggcgcgacaccgggcagtctgttgaatgccgccgacgcggccatgtaccaagccaagcgc
ggttcgcgaggcgggcaacacacagtgggggcggagctccctatcgttcaggttcaaaac
aggagctaa
DBGET
integrated database retrieval system
