Pseudomonas protegens Cab57: PPC_0880
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Entry
PPC_0880 CDS
T03613
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppro03016
]
PPC_0880 (truB)
Enzymes [BR:
ppro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PPC_0880 (truB)
Transfer RNA biogenesis [BR:
ppro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PPC_0880 (truB)
Prokaryotic type
PPC_0880 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
BAO60227
LinkDB
All DBs
Position
990977..991894
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLQTREVTVGRADIEAVLPEFRGEIK
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatccgtcgtaacgtcagcggcatcatcctcctggacaagccg
ctgggcttcacctccaacgcggcgctgcagaaggtccgttggctgctcaatgccgagaag
gccggccacaccggtagcctcgaccccctggccaccggcgttttgccgctgtgctttggc
gaggccaccaagttctcgcaatacctgctcgattccgacaagggttacgaaaccctggct
cagttgggcaagaccaccaccaccgcggacgctgaaggcgaagttttgcagacccgcgaa
gtgaccgttggtcgtgccgatatcgaggcggtattgccggaatttcgtggcgaaatcaag
cagataccgccgatgtactcggccctcaaacgcgatggccagccactctacaaactggct
cgtgcaggggaagtggtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctcgccttcgaaggtgacactgctcgcctggcggtggactgcagcaaaggcacctatatc
cgcaccctggtggaagatatcggtgaaaagctcggctgtggtgcctacgttgcagaactg
cgacggacccaggccggacctttcagcctggcccagacggtcaccctggaagagcttgaa
gcggtgcacgccgaaggcggcaacgaagcggtagaccgcttcctgatgccatcggacagc
ggtctgctggattggccgctgctgcagttctcggagcacagcgcgttctactggctcaac
ggccagccggtacgtgccccggatgcaccgaagttcggcatggtgcgggtacaggatcac
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
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