Pseudomonas protegens Cab57: PPC_0901
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Entry
PPC_0901 CDS
T03613
Symbol
speC
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00330
Arginine and proline metabolism
ppro00480
Glutathione metabolism
ppro01100
Metabolic pathways
ppro01110
Biosynthesis of secondary metabolites
ppro04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PPC_0901 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PPC_0901 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
PPC_0901 (speC)
Enzymes [BR:
ppro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
PPC_0901 (speC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
BAO60248
LinkDB
All DBs
Position
complement(1020267..1021430)
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AA seq
387 aa
AA seq
DB search
MSINVEDYFARETFQKMKAFADQQETPFVVIDTQMISQAYDDLRAGFEFAKVYYAVKANP
AVEIIDLLHEKGSSFDIASIYELDKVLGRGVNPANISYGNTIKKSKDIRYFYDKGVRLYA
TDSEADLRNIAKAAPGSKVYVRILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVP
YGVSFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLE
TYAEEIIRFLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVG
KFSGLIETMDESIKFPIWTEKKGEVEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLY
WLSTGAYTTSYSAVEFNGFPPLKAFYV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattaacgtcgaagactattttgcgcgcgaaacctttcaaaaaatgaaggcgttc
gccgaccagcaagaaaccccgttcgtggtcatcgacacccagatgatctcccaggcctac
gacgacctgcgcgccggtttcgaattcgccaaggtctactacgcggtcaaggccaacccg
gccgtcgagatcatcgacctgctgcacgaaaaaggctccagcttcgacatcgcttcgatc
tacgagctggacaaggtgctgggccgcggcgtcaacccggccaacatcagctacggcaac
accatcaagaagtccaaggacatccgctacttctatgacaagggcgtgcgcctgtacgcc
accgactccgaggccgacctgcgcaacatcgccaaggccgcaccgggctcgaaagtctac
gtgcgcattctcaccgaaggctccaccaccgccgactggccgctatcgcgcaagttcggc
tgccagaccgacatggccatggacctgctgatcctcgctcgcgacctgggcctggtgcct
tacggcgtgtcgttccacgtgggttcgcaacagcgcgacatcagcgtatgggacgccgcc
attgccaaggtcaaggtgatcttcgagcgcctcaaggaagaagacggcatcgagctgaag
ctgatcaacatggggggcggcttcccggccaactacatcacccgcaccaacagcctggaa
acctatgccgaggaaatcatccgcttcctcaaggaagacttcggcgacgacctgccggaa
atcatcctcgagccaggccgttcgctgatcgccaacgccggcatcctggtcagcgaagta
gtgctggtggcgcgcaaatcccgcaccgccgtcgagcgctgggtgtacaccgacgtgggc
aagttctccggcctgatcgaaaccatggacgagtccatcaagttcccgatctggaccgag
aagaaaggtgaagtggaagaagtggtgatcgccgggccgacctgcgacagcgccgacatc
atgtacgagaactacaagtacggcctgccgctgaacctggccatcggcgaccgcctgtac
tggctgtccaccggcgcctacaccaccagctacagcgcggtggaattcaacggtttcccg
ccgctgaaggccttctacgtttaa
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