Pseudomonas protegens Cab57: PPC_0908
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Entry
PPC_0908 CDS
T03613
Symbol
dppF
Name
(GenBank) dipeptide transporter ATP-binding subunit
KO
K12372
dipeptide transport system ATP-binding protein
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPC_0908 (dppF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_0908 (dppF)
Transporters [BR:
ppro02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
PPC_0908 (dppF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
NACHT
RsgA_GTPase
AAA_16
AAA_29
nSTAND1
AAA_23
PRK
nSTAND3
AAA_13
Mg_chelatase
RNA_helicase
AAA_15
MMR_HSR1
AAA_33
NB-ARC
Septin
AAA_25
AAA
G-alpha
Motif
Other DBs
NCBI-ProteinID:
BAO60255
LinkDB
All DBs
Position
complement(1028157..1029128)
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AA seq
323 aa
AA seq
DB search
MAVVLTARDLTRHYEVSRGLFKGHATVRALNGVSFELEAGKTLAVVGESGCGKSTLARAL
TLIEEPSSGSLKIAGQEVAGADKAQRKQLRKDVQMVFQSPYASLNPRQKIGDQLAEPLLI
NTKLSAAERREKVQAMMKQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEP
TSALDVSIQAQVLNLFMDLQQEFNTAYVFISHNLAVVRHVADQVLVMYLGRPVEMGPKED
IYTRPLHPYTQALLSATPTIHPDPDKPKIKIVGELPNPLNPPPGCAFHKRCPYATERCST
EEPALRQLDSRQVACHYAEQFVL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgttcttaccgcccgcgacctcacccgtcactacgaagtgtcccgtggcctg
ttcaagggccacgccaccgtgcgcgcactcaacggcgtgtccttcgagctggaagccggc
aagaccctggcagtggtgggtgaatccggctgtggcaaatccaccctggcgcgggccctg
accctgatcgaggaaccgtcttccggctcgctgaagatcgccggccaggaagtcgccggt
gccgacaaggcccagcgcaagcaactgcgcaaagacgtgcagatggtgttccagagccct
tatgcctcgctcaacccgcggcagaagatcggtgaccagctggccgagccgctgctgatc
aacaccaagctgtcggccgccgaacgccgggaaaaagtccaggcgatgatgaagcaggta
ggcctgcgccccgaacattaccagcgctacccgcacatgttctccggggggcagcgccag
cgtatcgccctggcccgggcaatgatgctgcagcccaaggtgctggtggcggacgaaccg
acctcggccctggacgtatcgatccaggcccaggtattgaacctgttcatggacctgcag
caggaattcaacaccgcctacgtgttcatttcccacaacctggcagtggtgcgccacgtg
gccgaccaggtgctggtgatgtacctcggccggccggtggaaatgggccccaaggaggac
atctacacccgccccctgcacccctacacccaggccctgctgtcggcgacaccaaccatc
cacccggacccggacaagccgaagatcaagatcgtcggcgagctgcccaacccgctgaac
ccaccaccgggctgcgccttccacaagcgctgcccttatgccaccgagcgttgcagcact
gaagagccggccctgcgccagctcgacagccgccaggtggcctgccactacgccgagcaa
ttcgtgctgtag
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