Pseudomonas protegens Cab57: PPC_0915
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Entry
PPC_0915 CDS
T03613
Symbol
nikA3
Name
(GenBank) nickel ABC transporter periplasmic nickel-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02010
ABC transporters
ppro02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPC_0915 (nikA3)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PPC_0915 (nikA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_0915 (nikA3)
Transporters [BR:
ppro02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
PPC_0915 (nikA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
FlhF_N
Motif
Other DBs
NCBI-ProteinID:
BAO60262
LinkDB
All DBs
Position
complement(1037271..1038896)
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AA seq
541 aa
AA seq
DB search
MFKKAVLPLLVSAGLLASAPFAQAATNLVFCSEGSPAGFDPGQYTTGTDFDASAETLYNR
LSQFERGGTAVIPGLATSWDISDDGLTYTFHLREGVKFHTTPYFTPTRTFNADDVLFTFN
RMIDKDMPFRKAYPTEFPYFTDMGMDTNITKVEKVDDKTVKFTLKTVDAAFIQNLAMSFA
SIQSAEYADKLLKEGKASDINQKPIGTGPFVFKSYQKDSNIRYTGNKDYWKPEDVKIDNL
IFAITTDPSVRIQKLKKNECQVTLFPRPADLKALKEDKTLKMPEQAGFNLGYIAYNVMPV
LKGRTDANPLADLKVRQALDMAVNKPQIIDSVYQGAGQLAVNAMPPTQWSYDTTIKDAKY
DPEKAKELLKEAGIKEGTQITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVNIVSYEW
GEYIKRSKGGENQAMIIGWSGDNGDPDNWLGTLFGCDAMNGNNFSKWCDKPYDALIKQAK
ATSDVAKRTELYKQAQHILKDAVPMTPIAHSTVFQPMRANVQDFKISPFGLNSFYGVSIG
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaagcagtccttccgttattagtcagcgccggcttgctcgccagcgcaccc
ttcgcccaagcggcgactaacctggtgttctgctctgaagggagcccggccggtttcgac
cctggccagtacaccaccggaaccgacttcgacgcctcagccgaaaccctctacaaccgc
ctcagccagttcgaacgcggcggcaccgcggtcattccgggcctggccaccagttgggac
atctcggacgacggtctgacctacaccttccacctgcgcgaaggcgtcaagttccacacc
acgccgtacttcaccccgacccgtactttcaacgccgacgacgtgctgttcaccttcaac
cgcatgatcgacaaggacatgccgttccgtaaggcctaccccaccgaattcccgtatttc
accgacatggggatggacaccaacatcaccaaggtcgagaaagtcgacgacaagaccgtc
aagttcaccctcaagaccgtggacgcagccttcatccagaacctggccatgagcttcgcc
tcgatccagtccgccgaatacgccgacaagctgctcaaggaaggcaaggccagcgacatc
aaccagaagccgatcggcactggccccttcgtgttcaagagctaccagaaagactcgaac
atccgctacaccggcaacaaggactactggaagcctgaagacgtgaagatcgacaacctg
atcttcgccatcaccaccgacccctcggtgcgtatccagaagctgaagaagaacgaatgc
caggtcaccctcttcccgcgtccggccgacctcaaggccctcaaggaagacaagaccctg
aagatgcctgaacaggcaggcttcaacctcggctacatcgcctacaacgtgatgccggtc
ctcaagggccgtaccgatgccaacccgctggccgacctcaaggtgcgccaggcgctggac
atggcggtgaacaagccgcagatcatcgattcggtgtaccagggcgccggccagctggcg
gtcaacgccatgcctccaacccagtggtcctatgacaccaccatcaaggacgccaagtac
gaccccgagaaagccaaggagctgctcaaggaagccggcatcaaggaaggcacccagatc
accctgtgggccatgccggtacagcgtccctacaaccccaacgccaagctgatggccgaa
atgctgcagtcggactgggcgaagatcggcctgaaagtgaacatcgtcagctacgagtgg
ggcgagtacatcaagcgctccaagggcggcgagaaccaggcgatgatcatcggctggagc
ggcgacaatggtgaccccgacaactggctcggcaccctgttcggttgcgatgcaatgaac
ggcaacaacttctcgaaatggtgcgacaagccttacgacgccctgatcaagcaagccaag
gctacctctgatgtagccaagcgcaccgagctgtacaagcaggcgcaacacatcctcaaa
gatgcagtaccgatgacacctatcgctcactcgacggtgttccaacccatgcgcgccaac
gtgcaggatttcaaaatcagcccctttggcttgaactccttctacggcgtcagcatcggc
aaataa
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