KEGG   Pseudomonas protegens Cab57: PPC_1071
Entry
PPC_1071          CDS       T03613                                 
Name
(GenBank) hypothetical protein
  KO
K20332  toxoflavin biosynthesis protein ToxC
Organism
ppro  Pseudomonas protegens Cab57
Pathway
ppro02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ppro00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PPC_1071
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st Beta-prop_EIPR1 DUF1513 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_Vps41 WD40_like Ge1_WD40 Beta-prop_HPS5 Beta-prop_SCAP BBS2_Mid Beta-prop_Nup120_160 PD40
Other DBs
NCBI-ProteinID: BAO60418
LinkDB
Position
complement(1201818..1203521)
AA seq 567 aa
MRHFGPISGIATFKDTYVATAGYDNQVILWDARTRTPIQRVLHDHLANQCAFNAAGTLLV
SASSDYTARVWEVPSLRLKTVLIGHDDDIEMAAFSPDGQTIATCSRDHSIRLFNLSGQTL
RILHGHTADVISVCWSADGQTLVSSSDDGSIRRWDANTGQQLETIDLGGVETDTVALSRE
GIIFAGDDEGKISIISPRGTLLQPAHSAGIKRIIWDDSQRLLISLSYDRSVMLWHLKQDG
TLVKTAETSLPSIIWPRSCALLGSHRIAFVTFGSRYATWDFATQTWDLSGIEPAVSLNAV
AVVGEDVYSIGDAGILHINGQPSIKAGSLCNFLLPFGDSVLTGGQMGTVFDARTGATLYQ
HRSPLNCGTTFIKDGALHAAIGTYTGEALIFCLDQQQPRFVTQVRMHENAIKGIAADETY
IFSVCATAAAAFFRIADFGLETYLEKAHERISNGCTQIQGGFASIGRDLKLRLWRDGASE
VFDTPHSHSIKCIAISRDRSMIATGSYGGTVAVFDLKKRVWASVEKPTASGISCLIHDAS
GEGFLASAYDGRIYPITPPAAVQSARP
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgagacatttcgggcccatcagcggcatcgccacgttcaaggacacctacgtcgccacc
gccggctacgacaaccaggtgatcctctgggatgccaggacccggaccccgatccagcgg
gtccttcacgatcacctggccaaccagtgcgcattcaacgccgccggcacgctgctggta
agcgccagcagcgactacaccgcgcgggtctgggaagtgccgtccctgcgcctgaagacc
gtgctcatcggccatgacgacgacatcgagatggccgccttctccccggacggccagacc
atcgccacctgctcccgggaccacagcatccgcctgttcaatctcagcggccagaccctg
cggatcctccacggccacaccgccgacgtgatctcggtgtgctggtcggccgacggccag
accctggtatcgagcagcgatgacggttcgatccggcgctgggatgccaataccgggcaa
cagctggaaaccatcgacctgggcggcgtagaaaccgacaccgtggccctgtcccgcgag
ggcatcattttcgccggcgacgacgaaggcaagatctccatcatcagcccccgcggcacc
ctgctgcagcccgcccacagcgccgggatcaagcggatcatctgggacgacagccagcgc
ctgctgatcagcctcagctacgaccgctcggtcatgctctggcacctcaagcaggacggc
accctggtcaagacggcggaaacctccctgccgagcatcatctggccacgcagttgcgcg
ctgctgggcagccatcgcatcgccttcgtcaccttcggctcacgctatgccacctgggat
ttcgccacccagacctgggacctcagcggcatcgaaccggcggtcagcctcaacgccgtg
gcggtggtcggcgaagacgtctacagcatcggcgacgccggcatcctgcatatcaacggc
caacccagcatcaaggccggcagcctgtgcaacttcctcctgccctttggcgacagtgtg
ttgaccggcggccagatgggcacggtgttcgacgcccgcaccggcgccaccctgtaccag
caccgctcgcccctgaactgcggcaccaccttcatcaaggacggagccttgcacgcagcc
atcggcacctacaccggcgaagcgctgatcttctgcctggaccagcaacagccgcgcttc
gtcacccaggtgcgcatgcatgagaacgccatcaaaggcatcgccgccgatgaaacctac
attttcagcgtgtgcgccaccgcagccgcggccttcttccggattgccgacttcggcctg
gaaacctacctggaaaaagcccacgagcggatctccaacggctgcacgcagatccagggc
ggcttcgccagcatcggtcgcgacctgaaactgcgcctgtggcgcgatggtgccagcgag
gtgttcgacacgccccacagccactcgatcaagtgcatcgccatctcccgggaccgctcg
atgatcgccaccggcagctacggcggcaccgtggccgtcttcgatctaaaaaagcgcgtc
tgggccagcgtggagaaacccaccgccagcggcatttcctgcctgatccatgacgccagc
ggcgaaggtttcctggccagcgcctacgacggccggatctacccgatcacgcccccggcc
gctgtccagtcggcgcgcccatga

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