Pseudomonas protegens Cab57: PPC_1130
Help
Entry
PPC_1130 CDS
T03613
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02024
Quorum sensing
ppro03060
Protein export
ppro03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PPC_1130 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PPC_1130 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPC_1130 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppro02044
]
PPC_1130 (ffh)
Enzymes [BR:
ppro01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PPC_1130 (ffh)
Secretion system [BR:
ppro02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PPC_1130 (ffh)
Eukaryotic Sec-SRP protein
PPC_1130 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
YqeC
APS_kinase
AAA_33
AAA_16
AAA_31
AAA_24
KTI12
ParA
cobW
ABC_tran
nSTAND3
Thymidylate_kin
6PF2K
AAA_30
SLFN-g3_helicase
AAA_14
AAA_17
AAA_19
AAA_5
Mg_chelatase
AAA_18
NACHT
ATP_bind_1
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BAO60477
LinkDB
All DBs
Position
1263534..1264910
Genome browser
AA seq
458 aa
AA seq
DB search
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAV
GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLNLSAVPPAVVLMAGLQGAGKTTTAGKL
ARFLKERKKKSVMVVSADVYRPAAIKQLETLANDIGVTFFPSDLSQKPVAIAEAAIKEAK
LKFIDVVIVDTAGRLHIDSEMMDEIQALHAAIKPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALEPFHPERIASRILGMGDV
LSLIEQAEATLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPNIGGV
NLAQMGNAQGAAEKQFKQMEAIINSMTPAERRDPELISGSRKRRIALGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGMGGMLPGGGMPKI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacctaaccgaccgtctctcgcagacgctgcgccatgtcaccggcaaggcc
aagctgaccgaggacaacatcaaagacaccctgcgcgaagtgcgcatggcgctgctcgaa
gccgacgttgcgttgccggtggtcaaggacttcgtcaactccgtgaaggagcgtgcggtc
ggcaccgaagtgtctcgcagcctgacgccgggccaggcttttgtgaagatcgtccaggcc
gagctggaaagcctgatgggcgcggccaacgaagatttgaacctcagcgcagtgccaccg
gccgtggtgctgatggccggtctgcagggggcgggtaagaccaccaccgccggcaagctt
gcgcgcttccttaaagagcgcaagaaaaagagcgtgatggtggtctccgcggacgtctac
cgtccggcggctatcaaacagctggaaaccctggccaatgatattggcgtgaccttcttc
ccatcggacctgagccagaagccggtagctatcgccgaagcggctattaaggaagcgaag
ctcaagttcatcgatgtcgtgattgtcgacaccgccggtcgcctgcacatcgacagcgag
atgatggacgagatccaggcgctgcacgcggccatcaagccggtggaaaccctgttcgtg
gtcgacgccatgaccggtcaggacgccgccaacaccgccaaggcctttggcgacgcgctg
ccgctgaccggtgtgatcctgaccaaggtcgacggcgatgcccgtggtggtgccgcgctg
tcggtgcgggccattaccggcaagccgatcaagtttatcggtatgggcgagaagagcgaa
gccctggagccgttccaccctgagcgcatcgcttcgcgcatcctcggcatgggcgacgtg
ctcagcctgatcgaacaggctgaagcgaccctcgacaaggacaaggccgacaagcttgct
aaaaaactgaagaagggcaagggcttcgacctcgaagacttccgcgatcagttgcagcag
atgaagaacatgggcggtctcggcggcctgatggacaagctgccgaacatcggtggcgtg
aacctggcgcagatgggcaatgcccagggcgcggcagagaaacagttcaagcagatggaa
gccatcatcaactccatgaccccggccgagcgccgcgaccccgagctgatcagcggttcg
cgcaagcgccggatcgccctgggttccggcacccaggtgcaggacatcggtcgcttgatc
aagcagcacaagcagatgcagaagatgatgaagaagttctccgccaagggcggtatggcc
aagatgatgcgcggcatgggcggtatgttgcccggcggcggcatgccgaagatctga
DBGET
integrated database retrieval system
