Pseudomonas protegens Cab57: PPC_1196
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Entry
PPC_1196 CDS
T03613
Name
(GenBank) RND family cation/multidrug efflux pump
KO
K18303
multidrug efflux pump
Organism
ppro
Pseudomonas protegens Cab57
Module
ppro_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_1196
01504 Antimicrobial resistance genes [BR:
ppro01504
]
PPC_1196
Transporters [BR:
ppro02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PPC_1196
Antimicrobial resistance genes [BR:
ppro01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PPC_1196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
BAO60543
LinkDB
All DBs
Position
1339278..1342334
Genome browser
AA seq
1018 aa
AA seq
DB search
MGFNLSAWALRNRQIVLFLMLLLAIVGALSYTKLGQSEDPPFTFKAMVIRTNWPGATAQE
VSRQVTERIEKKLMETGEYDRIVSFSRPGESQVTFIARDSMHSNEVPELWYQVRKKISDI
RQTLPPGIQGPFFNDEFGTTFGNIYALTGQGFDYAVLKDYADRIQIQLQRVKDVGKVDLL
GLQDEKIWIELSNVKLATLGLPLAAVQQALEEQNAVSTAGFFETPSERVQLRVSGNFQTV
EQIRNFPIRVAGRTFRIGDVADVRRGFNDPPAPRMRFMGEDAIGLAVAMKEGGDILVLGK
ALEGEFSRLQKSLPAGMELRKVSDQPAAVKTGVGEFVRVLAEALIIVLLVSFFSLGVRTG
MVVALAIPLVLAMTFATMYYLGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGFD
RIKAASFAWTSTAFPMLTGTLITAAGFLPIATAQSGTGEYTRSIFQVVTIALVASWIAAV
VFVPYLGEKLLPDLAKIHAAKHGAESNPHGTPFYQRVRRVVGWCVERRKTVIVLTILLFV
GSVMLFRFVPQQFFPASGRLELMVDLKLAEGASLSNTADEVKRLEALLKEHAGIDNYVAY
VGTGSPRFYLPLDQQLPATSFAQFVVLAKSIEEREELRGWLIETLNEQFPALRSRVTRLE
NGPPVGYPVQFRVTGEHIEEVRALARKVAAKVRENPHVVNVHLDWEEPSKVVYLNIDQDR
ARALGVSTANLSKFLQSSLIGSTVSQYREDNELIEILLRGTREERTELSLLPSLAVPTEN
GQSVSLSQVATLEYGFEEGVIWHRNRLPNVTVRADIYGKEQPATLVQQILPTLEPVRAEL
PDGYLLEVGGTVEDSTRGQNSVKAGVPLFIVVVLTLLMIQLRSFSRTAMVFLTAPLGLIG
VTLFLLVFRQPFGFVAMLGTIALSGMIMRNSVILVDQIEQDIKAGHKPWDAIIEATVRRF
RPIVLTALAAVLAMIPLSRSVFFGPMAVAIMGGLIVATALTLLFLPALYAAWFRVKKT
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcaacctttccgcctgggcgttgcgcaatcgccagatcgttctgttcctgatg
ttgctgctggccattgtcggtgcgctgtcctacaccaagctggggcagagcgaggatccg
cctttcaccttcaaggccatggtgatccgcaccaactggcccggggccacggcccaggaa
gtgtcgcgccaggtcaccgagcgcattgaaaagaagctgatggagactggcgagtacgac
cgcatcgtgtccttctcgcggccgggggagtcccaggtgaccttcatcgcccgggactcg
atgcactccaacgaggttcccgagctgtggtaccaggtacgcaagaagatcagtgatatc
cggcagaccctgccgcccggtatccaggggccgttcttcaatgatgagttcggcaccacc
ttcggcaatatctatgcgttgaccgggcagggctttgactacgcggtactcaaggactac
gccgaccgcatccagatccagctgcaacgggtcaaggacgtgggcaaggtcgacctgctg
ggcctgcaggacgagaaaatctggatcgagctgtccaacgtcaagctggcgaccctgggc
ctgcccctggcggcggtgcaacaggccctggaagaacagaacgcagtgtccaccgctggg
ttcttcgagaccccgagcgagcgggtgcaactgcgggtgtcgggcaatttccagaccgtg
gagcagatccgcaatttcccgatccgcgtcgccggtcgtaccttccgcatcggtgatgtg
gcggacgtgcgtcgtggtttcaacgatccgcccgcgccgcgcatgcgcttcatgggtgaa
gacgccatcggcctggctgtggcgatgaaggaggggggtgacatcctggtgttgggcaag
gccctggaaggcgagttctcgcgcctgcagaaaagcctgccggcggggatggaactgcgc
aaggtgtccgaccagccggcggcggtgaagaccggggtgggcgagttcgtccgggtgctg
gccgaggccctgatcatcgtgctgctggtgagtttcttctccctgggagtgcggaccggg
atggtggtggccctggcgattcccctggtgctggcgatgaccttcgccaccatgtactac
ctggggatcggcctgcacaagatttccctgggggcgctggtgctggccctgggcttgctg
gtggacgacgcgatcattgcggtagagatgatggcgatcaagatggagcagggcttcgac
cggatcaaggccgccagcttcgcctggaccagtaccgccttccccatgctcaccggcacc
ctgatcactgcggcgggcttcctgccgatcgccacggcccagtccggcacgggcgaatac
acccgttcgatcttccaggtggtgaccattgccctggtggcctcgtggattgcagccgtg
gtgttcgtgccgtacctgggggaaaaactgctgccggacctggcgaagatccacgccgcc
aagcacggcgccgaatccaatccccacggtacacccttctaccagcgggtccggcgggta
gtgggctggtgcgtggagcggcgcaagacggtgatcgtcctgaccatcctgctgttcgtc
ggctcggtgatgctgttccgtttcgttccccagcagttcttcccggcctcgggtcgcctg
gaactgatggtcgacctgaagctggcggaaggcgcgtccctgagcaacaccgccgatgag
gtcaagcgcctggaagccttgctcaaggagcatgcgggcatcgacaactacgtggcctac
gtgggcaccggttcgccgcggttctacctgccgctggaccagcaactgccagccaccagc
tttgcccagttcgtggtgctggccaagagcatcgaggagcgtgaagagctgcgcggctgg
ttgatcgaaaccctcaacgagcagttcccggcgctgcgctcgcgggtcacgcgcctggag
aacgggccgcccgtgggctacccggtgcagttccgggtcaccggcgagcacatcgaggaa
gtccgagccctggcgcgcaaggtagcggccaaggtgcgagagaacccccatgtggtcaac
gtgcacctggattgggaagagcccagcaaggtggtctacctgaacatcgaccaggaccgg
gcccgggccttgggagtgagcaccgccaacctgtcgaaattcctccagagttcgctgata
ggctccaccgtcagccagtaccgggaagacaatgagctgatcgagatcctgctgcggggc
acccgcgaggaacgcaccgaactgtcgttgctgccgagcctggcggtgcctaccgagaat
ggccagagcgtgtccctgtcccaggtggcgaccctggagtacggcttcgaggaaggggtg
atctggcaccgcaaccgcctgcccaacgtcaccgtgcgcgccgacatctacggcaaggag
cagccggcgaccctggtgcagcagatcctgccgaccctggagccggttcgcgccgagctg
cccgatggttacctgctggaagtgggtggcacggtcgaggactcgactcggggccagaac
tcggtgaaggccggcgtgccgctgttcatcgtggtggtgctgaccttgctgatgatccag
ctgcgcagtttctcgcgcacggccatggtgttcctcacggcgcccctgggattgatcggg
gtcaccttgttcctgctggtgttccgccagcccttcggcttcgtggccatgctcgggacc
attgccctgtcggggatgatcatgcgcaactcggtgatcctggtggaccagatcgagcag
gacatcaaggcggggcacaagccctgggatgcgatcatcgaagccacggtgcggcgtttc
cggcccatcgtgctgaccgccctggcggcggtgctggcgatgatcccgctgtcgcgcagt
gtgttcttcgggccgatggcagtggccatcatgggtgggctgatcgtggcgacggcgctg
accctgttgttcctgccggcgctgtatgcggcctggttcagggtcaagaaaacctag
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