Pseudomonas protegens Cab57: PPC_1481
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Entry
PPC_1481 CDS
T03613
Name
(GenBank) ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppro03009
]
PPC_1481
Enzymes [BR:
ppro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
PPC_1481
Ribosome biogenesis [BR:
ppro03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PPC_1481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BAO60828
LinkDB
All DBs
Position
complement(1637088..1637780)
Genome browser
AA seq
230 aa
AA seq
DB search
MRIDRFLSNLPRFNRQQVRVLLVQRRIRIDGQPVSDPKAEVREFSRVELDDEVLQAGKPA
RYFMLHKPMGCVSAIRDPEHKTVLELIHEPDPQDLHIAGRLDYNTTGLMLITNDGNWSRR
LTQPQTKLPKLYYVETEQEIGPEYVETFARGLYFAFEDLTTLPAQLQILGPRSARLSIVE
GRYHQVKRMFGHFNNKVLRLHRERMGPLLLDERLAPGEYRALSDAEIRLI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgaccgttttctcagcaacctgccccgtttcaaccgccagcaagtgcgcgtg
ctgctggtgcaacggcgtattcgcatcgatgggcagccggtcagcgaccccaaggccgag
gtccgcgaattcagccgtgtggagctggacgacgaagtgctgcaggccggcaagccggcg
cgctacttcatgctgcacaagcccatgggctgcgtcagcgccatccgcgaccccgagcac
aagaccgtgctcgaactgatccatgagccggacccgcaggatctgcatatcgccgggcgc
ctggactacaacaccaccgggctgatgctgatcaccaacgatggcaactggtcgcggcgc
ctgacccagccccagaccaaactgcccaagctctattacgtggaaaccgagcaggagatc
ggtcccgaatacgtcgagaccttcgctcgtggcctgtatttcgccttcgaggacctgacc
accctgcccgctcaactgcagatcctcggcccccgcagcgcccggctgagcatcgtcgaa
gggcgctatcaccaggtcaagcgcatgttcggccacttcaacaacaaggtgctgcgcctg
caccgcgaacgcatgggcccgctgctgctggacgaacgcctggcccccggcgaataccgt
gctctaagcgacgccgaaatacgcctgatctga
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