Pseudomonas protegens Cab57: PPC_1488
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Entry
PPC_1488 CDS
T03613
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PPC_1488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppro03400
]
PPC_1488
Enzymes [BR:
ppro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PPC_1488
DNA repair and recombination proteins [BR:
ppro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PPC_1488
Prokaryotic type
PPC_1488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAO60835
LinkDB
All DBs
Position
1642071..1642769
Genome browser
AA seq
232 aa
AA seq
DB search
MAMTADDRIKLEPSWKEALRAEFDQPYMSELREFLRQEHAAGKEIYPPGPMIFNALNSTP
LDKVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQS
WADQGVLMLNTTMTVERANAASHAGKGWQFFTDRIIEVVSEHQPHLVFLLWGAHAQSKQK
LIDATKHLVLTSVHPSPLSAYRGFLGCGHFSRTNKYLEQNGETPIEWRLPPL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggccatgactgctgacgatcgtatcaaactcgaaccgagctggaaggaggccctgcgt
gccgaattcgaccagccctacatgagcgaactgcgggagttcctgcgccaggaacatgcc
gccggcaaggaaatctacccgccgggaccgatgatcttcaacgccttgaactccacgccg
ctggataaggtcaaggtggtgatcctcggccaggacccctaccacgggccgggtcaggcc
cacgggttgtgcttctcggtgcagcccggggtgcccgcgccaccgtcgctggtgaatatc
tataaagagctcaagcgcgacctgaacatcgatatccccaaccatggctacctgcagagc
tgggccgaccagggcgtgctgatgctcaacaccaccatgaccgtggaacgggcgaacgcc
gcttcccatgcgggcaagggctggcagttcttcaccgaccggatcatcgaagtggtcagc
gagcatcagccgcacctggtgttcctgctgtggggcgcccatgcccagagcaagcagaag
ctgatcgacgccaccaagcacctggtgctgacctcggtgcacccttcgcccttgtcggcc
tatcgcggctttcttggttgcgggcacttcagccgtaccaacaaatacctcgagcagaac
ggcgagacgccgatcgagtggcgcctgccgccgttgtaa
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