Pseudomonas protegens Cab57: PPC_1532
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Entry
PPC_1532 CDS
T03613
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00071
Fatty acid degradation
ppro00362
Benzoate degradation
ppro00650
Butanoate metabolism
ppro01100
Metabolic pathways
ppro01120
Microbial metabolism in diverse environments
ppro01200
Carbon metabolism
ppro01212
Fatty acid metabolism
Module
ppro_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PPC_1532
09103 Lipid metabolism
00071 Fatty acid degradation
PPC_1532
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PPC_1532
Enzymes [BR:
ppro01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PPC_1532
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
Pyr_redox_2
NAD_binding_7
NAD_binding_2
Pyr_redox
FAD_binding_3
Methyltransf_11
FAD_oxidored
ApbA
Methyltransf_31
Methyltransf_12
F420_oxidored
Pyr_redox_3
TrkA_N
NAD_Gly3P_dh_N
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
BAO60879
LinkDB
All DBs
Position
complement(1692063..1694183)
Genome browser
AA seq
706 aa
AA seq
DB search
MSRDTAQPSVASALHGNILVLTLDNPPVNALGVEVRRGLLAAMDSAADDPTVAAILLVGA
GRHFCGGADIREFGQAPQAPALPAVVKRIEDSAKPVVAAIQGVALGGGLEVALAAHYRLT
LGSARLGLPEVLLGLLPGAGGTQRLPRLIGARAALELMLSGRHLNAREALDLGVVDRLAE
GEDALAAGLAYARELVDSHAGVRRTRDARALGDQHLQREQINAAREQLTHKAKGLLSPQN
IIRAVEAALDRPFDQGLEEERRLFQECLDSPQRAGLVHAFFAEREVLKAPETRIAQPRPI
EQVAVVGGGTMGAGIAVSALDAGLQVTMIERDQQALNRGRGNVEKVYDGLIEKGRLDAAG
KAATLARFRTSLDYQDLARADLVIEAVFEDMAAKQAVFKELDRVCKPGAVLASNTSYLDL
NAIADSVSRPADVIGLHFFSPANIMKLLEIVVPAKVAPDVVATAFELAKKLRKVPVRAGV
CDGFIGNRILAVYRQAADYMMEDGASPYQIDQALRDFGFPMGPFQVADLAGGDIGWATRK
RKAATRNPDARYVQIADRLCERGWFGQKTGRGYYLYAQDPRSATQDPEVLAIIDAERARA
GITPRPFGNPEILRRYMAAMINEGANVVHEGIALRPLDVDITFIHGYGFPRYRGGPLKYA
DQYGLPQVLADIREFAEQDPLFWKASPLLEQLVERGENFDSLNHSH
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcgacaccgcccagccctctgtggcatccgccctgcacggcaacattctggtc
ctgaccctcgacaacccgccggtgaacgcccttggcgtggaggtcaggcgcgggctgctg
gccgccatggacagcgccgccgacgatccgacggtggccgccatcctgctggtcggcgcc
gggcgccacttctgtggcggcgccgatattcgcgaattcggccaggcgccccaggccccg
gcattgccagcggtggtcaagcgcatcgaggacagcgccaaaccggtggtggcggccatc
cagggcgtggcactgggaggcggcctggaagtggccctggcggcccactaccgcctgacc
ctgggcagcgcccgcctcggcctgccggaagtgctgctcggcctgctgcccggggccggt
ggcactcagcgcctgccacgcctgatcggtgcccgggcggccctggaactgatgctcagc
ggccgtcacctgaatgcccgggaggccctcgacctgggggtggtggaccgcctggcggag
ggtgaggatgccctggctgccggcctggcctatgcccgcgagctggtggacagccatgcc
ggcgtgcggcgcacccgggacgcccgggccctgggcgatcagcatctgcaacgcgaacag
atcaacgccgcccgcgaacagctcacgcacaaggccaagggcctgctgtcgccgcagaac
atcattcgtgcggtcgaggcggcccttgaccggcccttcgatcaaggcctggaggaagaa
cgccggctgttccaggaatgcctcgacagcccgcagcgtgccgggctggtacacgccttt
ttcgccgagcgcgaagtgctcaaggccccggaaacccgtatcgcccagccccgccccatc
gaacaggtggccgtggtcggcggcggcaccatgggcgccggcatcgctgtctcggccctc
gacgccggcctgcaggtcaccatgatcgagcgcgaccagcaggccctgaaccgcggccgg
ggcaacgtcgagaaggtctatgacgggctgatcgaaaaaggccgcctggatgccgccggc
aaggccgcgaccctggcccgcttccgcaccagcctggactaccaggacctggcccgggcc
gacctggtgatcgaagcggtgttcgaggacatggccgccaagcaggcggtgttcaaggaa
ctggaccgggtatgcaaacctggcgcggtgctggccagcaacacctcctacctggacctc
aacgccatcgccgacagcgtctcgcggcctgccgatgtcatcgggctgcacttcttctcc
cccgccaacatcatgaagctgctggagatcgtggtcccggccaaggtcgcaccggacgtg
gtggccacggccttcgaactggcgaagaaactgcgcaaggtgccggtgcgtgccggggtc
tgcgatggtttcatcggcaaccggatcctcgcggtctaccgccaggcggcggactacatg
atggaagacggcgcttcgccctatcagatcgaccaggccctgcgcgacttcggcttcccc
atgggacccttccaggtggccgacctggccggcggcgacatcggctgggcgacgcgcaaa
cgcaaggccgccacccgcaatcccgacgcgcgctacgtgcagattgccgaccgcctgtgc
gagcgcggctggttcggacaaaagaccggccgtggctactacctctatgcccaggacccg
cgcagcgccacccaggacccggaagtcctggccatcatcgacgccgagcgggcccgggcc
ggcatcacgccccgccccttcggcaacccggagatcctgcggcgctacatggcggcgatg
atcaacgaaggcgccaacgtggtgcacgaaggcatcgccctgcgccccctggatgtggac
atcacctttatccatggctacggcttcccgcgctatcgcggtggcccgctcaagtacgcc
gaccagtacggcctgccccaggtgctggcggacatccgcgaattcgccgaacaagacccg
ctgttctggaaagcctcgccactgctggagcagttggtggagcgcggcgagaacttcgac
agcctcaaccacagccattga
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