Pseudomonas protegens Cab57: PPC_1595
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Entry
PPC_1595 CDS
T03613
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPC_1595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_1595
Transporters [BR:
ppro02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PPC_1595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_16
AAA_29
AAA_30
HUTI_composite_bact
AAA_5
AAA_21
AAA_33
P-loop_TraG
AAA_18
DUF87
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BAO60942
LinkDB
All DBs
Position
complement(1758689..1760521)
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AA seq
610 aa
AA seq
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MLFRRFEQLIDIFRDAPSAPPPNRVLPFYFHYIKQVWPSFVALLVVGLFVALIEVSLFSY
LSTIIDLAQGTPSVQVFTDHGLELAWMAVVALLFRPLMVGLHDLLMHQTINPGMTSLIRW
QNHSYVLRQSLNFFQNDFAGRIAQRIMQTGYSLQDSSVQVIDALWHVTIYAIGSLVLFAD
ADWRLMIPLLLWIAGFIGAMRYFVPRIQKRSVDASDARSKLMGRIVDGYTNITTLKLFAH
THFEQSYAREAIAEQTEKSQLAGRVVTAMDVTITSLNGLLIAGTTGLALWLWSQSLISAG
AIALATGLVIRIVNMSGWIMWVINGIFENIGMVEDGLKTIAQPLQLTDREQAPKLAVAQG
GVRFEHVEFHYGKANRVISDLNLEIRPGEKIGLIGPSGAGKSTLVNLLLRLYDLQGGKIL
IDGQDIAGVTQESLRERIGMITQDTSLLHRSIRDNLLYGRPDATDEELWEAVRKARADEF
IPLLSDAQGRTGFDAHVGERGVKLSGGQRQRIAIARVLLKDAPILIMDEATSALDSEVEA
AIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLEQGRIAETGTHAELLAHGGLYARLWQ
HQTGGFVGID
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctctttcgtcgttttgaacaactgatcgacatcttccgcgacgctcccagcgccccc
ccgcccaaccgggtcctgcccttctacttccactacatcaagcaagtctggccgagcttc
gtcgccctgctggtggtgggcctgttcgtggccctgatcgaggtgtcgctgttcagctac
ctgagcaccatcatcgacctggcccagggcacccccagcgtccaggtgtttaccgaccac
ggcctggaactggcctggatggcggtggtggcgctactgttccggcccctgatggtgggc
ctgcacgacctcctgatgcaccagaccatcaaccctggcatgaccagcctgatccgctgg
cagaaccacagctacgtgctgcgccagagcctaaacttcttccagaacgacttcgccggg
cgcatcgcccagcgcatcatgcagaccggctattcgctgcaggactcctcggtgcaggtg
atcgatgccctgtggcacgtgaccatctacgccatcggttccctggtgctgttcgccgac
gccgactggcgcctgatgatcccgctgctgctgtggatcgccggcttcatcggtgccatg
cgctacttcgtgccacgcatccagaagcgctcggtggacgcctccgacgcccgctccaag
ctgatggggcgaatcgtcgacggctacaccaacatcaccaccctcaagctcttcgcccat
acccacttcgagcagagctacgcccgcgaggcgatcgcggagcagaccgaaaagagccag
ctggccgggcgcgtggtcaccgccatggacgtgaccatcaccagcctcaacggcctgctg
atcgccggcaccaccggcctggccctgtggctgtggagccagtcgctgatcagcgccggg
gccattgccctggccaccgggctggtgatccgcatcgtcaacatgtccggctggatcatg
tgggtgatcaacggcatcttcgaaaacatcggcatggtcgaggacggcctgaagaccatc
gcccagcccctgcaactcaccgaccgcgagcaggcgccgaagctggcggtggcccagggc
ggcgtgcgtttcgaacatgtggaattccactacggcaaggccaaccgggtcatcagcgac
ctcaacctggagatccgcccgggagagaagatcggcctgatcggcccgtccggggccggc
aaatcaaccctggtcaacctgctgctgcgcctctacgacctacagggcggcaagatcctc
atcgacggccaggacatcgccggggtaacccaggaaagcctgcgcgaacgcatcggcatg
atcacccaggacacctcgctgctgcaccgctcgatccgcgacaacctgctctacggccgc
cccgacgccaccgacgaggaactctgggaagcagtgcgcaaggcgcgtgccgacgagttc
atcccgttgttgtccgacgcccagggccgcaccggcttcgacgcccatgtcggcgaacgc
ggggtcaagttgtccggcggccagcgccagcgcatcgccattgcccgggtgctgctcaag
gatgcaccgatcctgatcatggacgaagccacctcggccctggactcggaagtggaagcg
gcgatccaggaaagcctggagaccctgatgcaaggcaagaccgtgatcgccatcgcccac
cgcctctccaccatcgcccgcatggaccgcctggtggtcctggaacaggggcgcatcgcc
gagaccggtacccacgccgaactgctggcccatggcggcctgtatgcgcgcctgtggcag
caccagaccggaggcttcgtcggcatcgactga
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