Pseudomonas protegens Cab57: PPC_1602
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Entry
PPC_1602 CDS
T03613
Name
(GenBank) mechanosensitive ion channel MscS
KO
K16053
miniconductance mechanosensitive channel
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_1602
Transporters [BR:
ppro02000
]
Other transporters
Pores ion channels [TC:
1
]
PPC_1602
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
PMT_4TMC
Motif
Other DBs
NCBI-ProteinID:
BAO60949
LinkDB
All DBs
Position
complement(1765271..1766569)
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AA seq
432 aa
AA seq
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MDFKQLWLNTQDLWGALDQHPLLHAGIGLALLLVVALLVGRVARYLVLHAVKLLGRQPAL
HWLNDLRHNKVFHRLAQMTPSLVIQFGLHLVPELSKTSLLFLGNLAMAFTILFQLLALSA
LLNALLDIYARTEHARTRSIKGYVQLAKMVLYVFGAIIIVATLIDRSPLLLLSGLGAMSA
VILLVYKDTLLSFVASVQLTSNDMLRVGDWIEMPQVGADGDVVDITLHTVKVQNFDKTIV
SIPTWRLMSESFKNWRGMQQSGGRRIKRSLYIDASGVRFLHDDEEVRLSKVRLLTDYIGR
KQSELKSWNEAQGNVAALSANRRRMTNIGTFRAYALAYLKSHPEIQPNMTCMVRQMQTTA
QGIPLEIYCFTRTTAWVDYERIQGDIFDYLLAVMPEFGLNLYQQPSGTDLRAGLLPAVLG
ASHVPTVEKQAL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaacagctctggctcaatacccaggatctctggggagcactcgaccaacac
cctctcctgcacgccggcatcggcctggccctgttactggtggtcgccctgctggtcgga
cgagtggcacgctacctggtgctgcacgcggtcaagctgctgggccgccagccggccctg
cactggctcaacgacctgcgccacaacaaggtgttccaccgcctggcacagatgactcca
tccctggtgatccagttcggcctgcacctggtaccggagctgagcaagaccagcctgctg
ttcctcggcaacctggccatggccttcaccatcctgttccagctcctggccctgagcgcc
ctgctcaatgccctgctggacatctacgcgcgcaccgaacacgcccgcacccgctcgatc
aagggctatgtgcagttggcgaaaatggtgttgtacgtgtttggcgcgatcatcatcgtc
gccaccctgatcgaccgctcgccgctgttgctgctgtcgggcctgggcgccatgtcggcg
gtgatcctgttggtctacaaggacaccctgctgtccttcgtggccagcgtacagttgacc
agcaacgacatgctgcgggtcggcgactggatcgaaatgccccaggtcggcgctgacggc
gacgtggtggacatcaccctgcacacggtcaaggtgcagaacttcgacaagaccattgtc
tcgatccccacctggcggttgatgagcgaatcgttcaagaactggcgcggcatgcagcag
tccggcggccggcggatcaagcgcagcctgtacatcgacgccagcggcgtgcgcttcctg
catgacgatgaagaagtgcgcctgagcaaggtgcgcctgctcaccgactacatcgggcgc
aagcagtccgagctcaaaagctggaacgaagcccagggcaacgtcgccgcgctgtcggcc
aaccgccggcgcatgaccaatatcggcacctttcgcgcctatgccctggcgtacctgaag
agccacccggaaatccagccgaacatgacctgcatggtgcgccagatgcagaccacggcc
cagggcattcccctggagatctactgcttcacccgcaccaccgcgtgggtggattacgag
cgcatccagggggatatcttcgattacctgctggcggtgatgccggaattcggcctgaac
ctgtaccagcagcccagcggcaccgacctgcgggccggcctgctgcccgcggtgctgggt
gccagccatgtgccgacggtagagaagcaggctctgtaa
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